Science Packages
Science related packages
To install Raspberry Pi OS software on a Raspberry Pi
Packages are installed using Terminal. First get an updated package list by entering the following command in to terminal if this has not been done today sudo apt update
Then install your chosen package with the command sudo apt install package name
Find out more with the Guide to installing software with the apt command
Distro Version:
The latest Distro for Raspberry Pi OS is Bullseye, the previouse version was Buster. Next to each package is the version available for each distro.
Bullseye(#) = Raspberry Pi OS Bullseye
Buster(#) = Raspberry Pi OS Buster
Bullseye & Buster(#) = same version for both.
If only one Distro is listed then the package is only available on that distribution.
SCIENCE
Last Updated: 27 August, 2023
3depict
Bullseye:(0.0.22-2+b3) Buster:(0.0.21-1) visualisation and analysis for single valued point data www- Back to top
A
abacas
Bullseye:(1.3.1-9) Buster:(1.3.1-5) close gaps in genomic alignments from short reads wwwabacas-examples
Bullseye:(1.3.1-9) sample data for abacas to close gaps in genomic alignments wwwabinit
Bullseye:(9.2.2-1) Buster:(8.8.4-2) package for electronic structure calculations wwwabyss
Bullseye:(2.2.5+dfsg-1) Buster:(2.1.5-7) de novo, parallel, sequence assembler for short reads wwwacedb-other
Bullseye:(4.9.39+dfsg.02-5) Buster:(4.9.39+dfsg.02-4) retrieval of DNA or protein sequences wwwacedb-other-belvu
Bullseye:(4.9.39+dfsg.02-5) Buster:(4.9.39+dfsg.02-4) transitional package for belvu wwwacedb-other-dotter
Bullseye:(4.9.39+dfsg.02-5) Buster:(4.9.39+dfsg.02-4) transitional package for dotter wwwaces3
Bullseye:(3.0.8-7) Buster:(3.0.8-6) Advanced Concepts in Electronic Structure III wwwaces3-data
Bullseye:(3.0.8-7) Buster:(3.0.8-6) Advanced Concepts in Electronic Structure III wwwachilles
Bullseye:(2-10) Buster:(2-9) Artificial life and evolution simulator wwwadapterremoval
Bullseye:(2.3.1-3) Buster:(2.2.3-1) rapid adapter trimming, identification, and read merging of gene sequences wwwadapterremoval-examples
Bullseye:(2.3.1-3) Buster:(2.2.3-1) rapid adapter trimming, identification, and read merging (example data) wwwadms
Bullseye:(2.3.6-3) Buster:(2.3.6-2) Automatic device model synthesizer for Verilog-AMS wwwadun-core
Bullseye:(0.81-14) Buster:(0.81-13) Molecular Simulator wwwadun.app
Bullseye:(0.81-14) Buster:(0.81-13) Molecular Simulator for GNUstep (GUI) wwwaegean
Bullseye:(0.16.0+dfsg-2) Buster:(0.16.0+dfsg-1) integrated genome analysis toolkit wwwaeskulap
Bullseye:(0.2.2-beta2+git20190406.ef77f01-3+b1) Buster:(0.2.2-beta2+git20180219.8787e95-2) medical image viewer and DICOM network client wwwaevol
Bullseye:(5.0+ds-2) Buster:(5.0-2) digital genetics model to run Evolution Experiments in silico wwwaghermann
Bullseye:(1.1.2-3+b1) Buster:(1.1.2-2) Sleep-research experiment manager wwwaladin
Bullseye:(11.024+dfsg2-1) Buster:(10.076+dfsg-1) Interactive sky atlas for astronomical images and datasets wwwalfa
Bullseye:(2.1-1) Buster:(1.0-3+b1) Automated Line Fitting Algorithm wwwalgotutor
Bullseye:(0.8.6-4) Buster:(0.8.6-2) program for observing the intermediate steps of algorithm wwwalien-hunter
Bullseye:(1.7-8) Buster:(1.7-7) Interpolated Variable Order Motifs to identify horizontally acquired DNA wwwallelecount
Bullseye:(4.2.1-1) NGS copy number algorithms wwwaltree
Bullseye:(1.3.1-10+b1) Buster:(1.3.1-7+b1) program to perform phylogeny-based association and localization analysis wwwaltree-examples
Bullseye:(1.3.1-10) Buster:(1.3.1-7) example files for ALTree wwwamap-align
Bullseye:(2.2+git20080214.600fc29+dfsg-2) Buster:(2.2+git20080214.600fc29+dfsg-1) Protein multiple alignment by sequence annealing wwwampliconnoise
Bullseye:(1.29-9) Buster:(1.29-8) removal of noise from 454 sequenced PCR amplicons wwwandi
Bullseye:(0.13-3+b1) Buster:(0.12-4) Efficient Estimation of Evolutionary Distances wwwanfo
Bullseye:(0.98-8) Buster:(0.98-7+b1) Short Read Aligner/Mapper from MPG wwwaoflagger
Bullseye:(3.0.0-2+b1) Buster:(2.13.0-1) Find RFI in radio astronomical observations wwwapbs
Bullseye:(3.0.0+dfsg1-3+b1) Buster:(1.4-1) Adaptive Poisson Boltzmann Solver wwwapbs-data
Bullseye:(3.0.0+dfsg1-3) data files for APBS (Adaptive Poisson Boltzmann Solver) wwwapertium
Bullseye:(3.7.1-1) Buster:(3.5.2-1) Shallow-transfer machine translation engine wwwapertium-af-nl
Bullseye:(0.3.0-2) Buster:(0.2.0~r58256-2) Transitional dummy package for apertium-afr-nld wwwapertium-afr-nld
Bullseye:(0.3.0-2) Apertium translation data for the Afrikaans-Dutch pair wwwapertium-anaphora
Bullseye:(1.0.2-1) Anaphora resolution module for Apertium wwwapertium-apy
Bullseye:(0.11.7-2) Buster:(0.11.4-2) Apertium APY service wwwapertium-arg
Bullseye:(0.1.2~r65494-2.1) Buster:(0.1.2~r65494-2) Apertium single language data for Aragonese wwwapertium-arg-cat
Bullseye:(0.2.0-2) Buster:(0.1.0~r64925-2) Apertium translation data for the Aragonese-Catalan pair wwwapertium-bel
Bullseye:(0.1.0~r81357-3) Buster:(0.1.0~r81357-2) Apertium single language data for Belarusian wwwapertium-bel-rus
Bullseye:(0.2.1-1) Buster:(0.2.0~r81186-2) Apertium translation data for the Belarusian-Russian pair wwwapertium-br-fr
Bullseye:(0.5.1-1) Buster:(0.5.0~r61325-3) Apertium linguistic data to translate between Breton and French wwwapertium-ca-it
Bullseye:(0.2.1-3) Buster:(0.1.1~r57554-2) Transitional dummy package for apertium-cat-ita wwwapertium-cat
Bullseye:(2.6.0-2) Buster:(2.6.0-1) Apertium single language data for Catalan wwwapertium-cat-ita
Bullseye:(0.2.1-3) Apertium translation data for the Catalan-Italian pair wwwapertium-cat-srd
Bullseye:(1.1.0-1) Buster:(1.0.0~r82995-2) Apertium translation data for the Catalan-Sardinian pair wwwapertium-crh
Bullseye:(0.2.0~r83161-2.1) Buster:(0.2.0~r83161-2) Apertium single language data for Crimean Tatar wwwapertium-crh-tur
Bullseye:(0.3.0-1) Buster:(0.3.0~r83159-2) Apertium translation data for the Crimean Tatar-Turkish pair wwwapertium-cy-en
Bullseye:(0.1.1~r57554-7) Buster:(0.1.1~r57554-4) Apertium translation data for the Welsh-English pair wwwapertium-dan
Bullseye:(0.6.0-2) Buster:(0.5.0~r67099-2) Apertium single language data for Danish wwwapertium-dan-nor
Bullseye:(1.4.1-2) Buster:(1.3.0~r67099-2) Apertium translation data for the Danish-Norwegian pair wwwapertium-dev
Bullseye:(3.7.1-1) Buster:(3.5.2-1) Development tools and library for Apertium wwwapertium-en-gl
Bullseye:(0.5.2~r57551-3) Buster:(0.5.2~r57551-2) Apertium translation data for the English-Galician pair wwwapertium-eng-cat
Bullseye:(1.0.1-4) Apertium translation data for the English-Catalan pair wwwapertium-eo-en
Bullseye:(1.0.0~r63833-3) Buster:(1.0.0~r63833-2) Apertium linguistic data to translate between Esperanto and English wwwapertium-eo-fr
Bullseye:(0.9.1-1) Buster:(0.9.0~r57551-2) Apertium translation data for the Esperanto-French pair wwwapertium-es-ast
Bullseye:(1.1.0~r51165-3) Buster:(1.1.0~r51165-2) Apertium translation data for the Spanish-Asturian pair wwwapertium-es-it
Bullseye:(0.2.0~r78826-2.1) Buster:(0.2.0~r78826-2) Transitional dummy package for apertium-spa-ita wwwapertium-eu-en
Bullseye:(0.3.1~r56205-3) Buster:(0.3.1~r56205-2) Apertium translation data for the Basque-English pair wwwapertium-eval-translator
Bullseye:(1.2.1-2) Evaluate machine translation output against reference wwwapertium-fra
Bullseye:(1.5.0-1.1) Buster:(1.5.0-1) Apertium single language data for French wwwapertium-fra-cat
Bullseye:(1.9.0-1) Buster:(1.5.0-1) Apertium translation data for the French-Catalan pair wwwapertium-get
Bullseye:(1.0.0-2) Helper for Apertium and Giellatekno languages and pairs wwwapertium-hbs
Bullseye:(0.5.0~r68212-3.1) Buster:(0.5.0~r68212-3) Apertium single language data for Serbo-Croatian wwwapertium-hbs-eng
Bullseye:(0.5.1-1) Buster:(0.1.0~r57598-2) Apertium translation data for the Serbo-Croatian - English pair wwwapertium-hbs-mkd
Bullseye:(0.1.0~r76450-4) Buster:(0.1.0~r76450-2.1) Apertium translation data for the Serbo-Croatian-Macedonian pair wwwapertium-hbs-slv
Bullseye:(0.5.1-1) Buster:(0.1.0~r59294-2) Apertium translation data for the Serbo-Croatian-Slovenian pair wwwapertium-hin
Bullseye:(0.1.0~r59158-2.1) Buster:(0.1.0~r59158-2) Apertium single language data for Hindi wwwapertium-id-ms
Bullseye:(0.1.2-3) Buster:(0.1.1~r57551-2) Transitional dummy package for apertium-ind-zlm wwwapertium-ind-zlm
Bullseye:(0.1.2-3) Apertium translation data for the Indonesian-Malay pair wwwapertium-is-sv
Bullseye:(0.1.0~r76450-3) Buster:(0.1.0~r76450-2) Apertium translation data for the Icelandic-Swedish pair wwwapertium-isl
Bullseye:(0.1.0~r65494-2.1) Buster:(0.1.0~r65494-2) Apertium single language data for Icelandic wwwapertium-isl-eng
Bullseye:(0.1.0~r66083-3) Buster:(0.1.0~r66083-2) Apertium translation data for the Icelandic-English pair wwwapertium-ita
Bullseye:(0.10.0~r82237-2.1) Buster:(0.10.0~r82237-2) Apertium single language data for Italian wwwapertium-kaz
Bullseye:(0.1.0~r61338-2.1) Buster:(0.1.0~r61338-2) Apertium single language data for Kazakh wwwapertium-kaz-tat
Bullseye:(0.2.1-1) Buster:(0.2.1~r57554-2) Apertium translation data for the Kazakh-Tatar pair wwwapertium-lex-tools
Bullseye:(0.2.7-1) Buster:(0.2.1-1) Constraint-based lexical selection module wwwapertium-mk-bg
Bullseye:(0.2.0~r49489-3) Buster:(0.2.0~r49489-2) Apertium translation data for the Macedonian-Bulgarian pair wwwapertium-mk-en
Bullseye:(0.1.1~r57554-3) Buster:(0.1.1~r57554-2) Apertium translation data for the Macedonian-English pair wwwapertium-mlt-ara
Bullseye:(0.2.0~r62623-2.1) Buster:(0.2.0~r62623-2) Apertium translation data for the Maltese-Arabic pair wwwapertium-nno
Bullseye:(1.0.0-2) Buster:(0.9.0~r69513-3) Apertium single language data for Norwegian Nynorsk wwwapertium-nno-nob
Bullseye:(1.3.0-1) Buster:(1.1.0~r66076-2) Apertium translation data for the Norwegian Nynorsk-Norwegian Bokmål pair wwwapertium-nob
Bullseye:(1.0.0-2) Buster:(0.9.0~r69513-2) Apertium single language data for Norwegian Bokmål wwwapertium-oci
Bullseye:(0.1.0-1.1) Buster:(0.1.0-1) Apertium single language data for Occitan wwwapertium-oci-fra
Bullseye:(0.3.0-3) Apertium translation data for the Occitan-French pair wwwapertium-pol
Bullseye:(0.1.1-2) Buster:(0.1.1-1) Apertium single language data for Polish wwwapertium-pol-szl
Bullseye:(0.2.1-2) Apertium translation data for the Polish-Silesian pair wwwapertium-por-cat
Bullseye:(0.10.0-1) Apertium translation data for the Portuguese-Catalan pair wwwapertium-recursive
Bullseye:(1.0.1-1) Apertium recursive structural transfer module wwwapertium-rus
Bullseye:(0.2.0~r82706-1.1) Buster:(0.2.0~r82706-1) Apertium single language data for Russian wwwapertium-rus-ukr
Bullseye:(0.2.1-2) Apertium translation data for the Russian-Ukrainian pair wwwapertium-separable
Bullseye:(0.3.6-2) Buster:(0.3.2-1) Reordering separable/discontiguous multiwords wwwapertium-sme-nob
Bullseye:(0.6.1+ds.1-2) Buster:(0.6.0~r61921-2) Apertium translation data for the Northern Sami-Norwegian Bokmål pair wwwapertium-spa
Bullseye:(1.1.0~r79716-2.1) Buster:(1.1.0~r79716-2) Apertium single language data for Spanish wwwapertium-spa-arg
Bullseye:(0.5.0-1) Buster:(0.4.0~r64399-2) Apertium translation data for the Spanish-Aragonese pair wwwapertium-spa-cat
Bullseye:(2.2.0-2) Buster:(2.1.0~r79717-2) Apertium translation data for the Spanish-Catalan pair wwwapertium-spa-ita
Bullseye:(0.2.0~r78826-2.1) Buster:(0.2.0~r78826-2) Apertium translation data for the Spanish-Italian pair wwwapertium-srd
Bullseye:(1.2.0-1) Buster:(1.2.0~r82994-2) Apertium single language data for Sardinian wwwapertium-srd-ita
Bullseye:(1.1.0-1) Buster:(0.9.5~r82237-2) Apertium translation data for the Sardinian-Italian pair wwwapertium-swe
Bullseye:(0.8.0-2) Buster:(0.7.0~r69513-2) Apertium single language data for Swedish wwwapertium-swe-dan
Bullseye:(0.8.1-2) Buster:(0.7.0~r66063-2) Apertium translation data for the Swedish-Danish pair wwwapertium-swe-nor
Bullseye:(0.3.1-1) Buster:(0.2.0~r69544-2) Apertium translation data for the Swedish-Norwegian pair wwwapertium-szl
Bullseye:(0.1.0-1.1) Buster:(0.1.0-1) Apertium single language data for Silesian wwwapertium-tat
Bullseye:(0.1.0~r60887-2.1) Buster:(0.1.0~r60887-2) Apertium single language data for Tatar wwwapertium-tur
Bullseye:(0.2.0~r83161-2.1) Buster:(0.2.0~r83161-2) Apertium single language data for Turkish wwwapertium-ukr
Bullseye & Buster:(0.1.0~r82563-2) Apertium single language data for Ukrainian wwwapertium-urd
Bullseye:(0.1.0~r61311-2.1) Buster:(0.1.0~r61311-2) Apertium single language data for Urdu wwwapertium-urd-hin
Bullseye:(0.1.0~r64379-2.1) Buster:(0.1.0~r64379-2) Apertium translation data for the Urdu-Hindi pair wwwaragorn
Bullseye:(1.2.38-4) Buster:(1.2.38-2) tRNA and tmRNA detection in nucleotide sequences wwwarb-common
Bullseye & Buster:(6.0.6-4) phylogenetic sequence analysis suite - common files wwwarden
Bullseye:(1.0-5) Buster:(1.0-4) specificity control for read alignments using an artificial reference wwwart-nextgen-simulation-tools
Bullseye:(20160605+dfsg-4+b1) Buster:(20160605+dfsg-3) simulation tools to generate synthetic next-generation sequencing reads wwwart-nextgen-simulation-tools-profiles
Bullseye:(20160605+dfsg-4) Buster:(20160605+dfsg-3) profiles for art simulation tools wwwartfastqgenerator
Bullseye:(0.0.20150519-4) Buster:(0.0.20150519-3) outputs artificial FASTQ files derived from a reference genome wwwartfastqgenerator-examples
Bullseye:(0.0.20150519-4) Buster:(0.0.20150519-3) outputs artificial FASTQ files derived from a reference genome (examples) wwwasdftool
Bullseye:(2.7.2-1) Buster:(2.3.2-2) Command line tool to manipulate ASDF scientific data files wwwase
Bullseye:(3.21.1-2) Buster:(3.17.0-2) Atomic Simulation Environment wwwassembly-stats
Bullseye:(1.0.1+ds-3) get assembly statistics from FASTA and FASTQ files wwwassemblytics
Bullseye:(1.0+ds-2) Buster:(1.0+ds-1) detect and analyze structural variants from a genome assembly wwwastro-tasks
Bullseye:(3.0) Buster:(2.0) Debian Astronomy Pure Blend (tasksel tasks) wwwastromatic
Bullseye:(1.2) Buster:(1.1) Astronomical pipeline software collection wwwastrometry-data-2mass
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader wwwastrometry-data-2mass-00
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader (2'-2.8') wwwastrometry-data-2mass-01
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader (2.8'-4') wwwastrometry-data-2mass-02
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader (4'-5.6') wwwastrometry-data-2mass-03
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader (5.6'-8') wwwastrometry-data-2mass-04
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader (8'-11') wwwastrometry-data-2mass-05
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader (11'-16') wwwastrometry-data-2mass-06
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader (16'-22') wwwastrometry-data-2mass-07
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader (22'-30') wwwastrometry-data-2mass-08-19
Bullseye & Buster:(1.1) Astrometry.net 2MASS index files downloader (30'-2000') wwwastrometry-data-tycho2
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 index files wwwastrometry-data-tycho2-07
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 index files (22'-30') wwwastrometry-data-tycho2-07-bigendian
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 big endian index files (22'-30') wwwastrometry-data-tycho2-07-littleendian
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 little endian index files (22'-30') wwwastrometry-data-tycho2-08
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 index files (30'-44') wwwastrometry-data-tycho2-08-bigendian
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 big endian index files (30'-44') wwwastrometry-data-tycho2-08-littleendian
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 little endian index files (30'-44') wwwastrometry-data-tycho2-09
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 index files (44'-60') wwwastrometry-data-tycho2-09-bigendian
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 big endian index files (44'-60') wwwastrometry-data-tycho2-09-littleendian
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 little endian index files (44'-60') wwwastrometry-data-tycho2-10-19
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 index files (60'-2000') wwwastrometry-data-tycho2-10-19-bigendian
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 big endian index files (60'-2000') wwwastrometry-data-tycho2-10-19-littleendian
Bullseye & Buster:(2-4) Astrometry.net Tycho-2 little endian index files (60'-2000') wwwastrometry.net
Bullseye:(0.82+dfsg-1) Buster:(0.76+dfsg-3+b2) Astrometry plate solver wwwastronomical-almanac
Bullseye:(5.6-7) Buster:(5.6-6) astronomical almanac - calculate planet and star positions wwwastropy-utils
Bullseye:(4.2-6) Buster:(3.1.2-2) Command line tools from astropy wwwatac
Bullseye:(0~20150903+r2013-8+b1) Buster:(0~20150903+r2013-6+b3) genome assembly-to-assembly comparison wwwataqv
Bullseye:(1.2.1+ds-1) ATAC-seq QC and visualization wwwatropos
Bullseye:(1.1.29+dfsg-1) NGS read trimming tool that is specific, sensitive, and speedy wwwaugur
Bullseye:(11.0.0-1) pipeline components for real-time virus analysis wwwaugustus
Bullseye:(3.4.0+dfsg2-2) Buster:(3.3.2+dfsg-2) gene prediction in eukaryotic genomes wwwaugustus-data
Bullseye:(3.4.0+dfsg2-2) Buster:(3.3.2+dfsg-2) data files for AUGUSTUS wwwautodock
Bullseye:(4.2.6-8) Buster:(4.2.6-6) analysis of ligand binding to protein structure wwwautodock-getdata
Bullseye:(4.2.6-8) Buster:(4.2.6-6) instructions for getData to collect compounds wwwautodock-test
Bullseye:(4.2.6-8) Buster:(4.2.6-6) test files for AutoDock wwwautodock-vina
Bullseye:(1.1.2-6) Buster:(1.1.2-5) docking of small molecules to proteins wwwautogrid
Bullseye:(4.2.6-8) Buster:(4.2.6-6) pre-calculate binding of ligands to their receptor wwwautogrid-test
Bullseye:(4.2.6-8) Buster:(4.2.6-6) test files for AutoGrid wwwavce00
Bullseye:(2.0.0-8) Buster:(2.0.0-7) Conversion of ESRI Arcinfo Vector Coverage in E00 format wwwavogadro
Bullseye:(1.93.0-2) Buster:(1.2.0-4+b1) Molecular Graphics and Modelling System wwwavogadro-utils
Bullseye:(1.93.1-3) Molecular Graphics and Modelling System (library) wwwaxe-demultiplexer
Bullseye:(0.3.3+dfsg-3) Buster:(0.3.3+dfsg-1) Trie-based DNA sequencing read demultiplexer www- Back to top
B
baitfisher
Bullseye:(1.2.7+git20190123.241d060+dfsg-1) Buster:(1.2.7+git20180107.e92dbf2+dfsg-1) software package for designing hybrid enrichment probes wwwbali-phy
Bullseye:(3.6.0+dfsg-1) Buster:(3.4+dfsg-1) Bayesian Inference of Alignment and Phylogeny wwwbamkit
Bullseye:(0.0.1+git20170413.ccd079d-2) tools for common BAM file manipulations wwwbamtools
Bullseye:(2.5.1+dfsg-9) Buster:(2.5.1+dfsg-3) toolkit for manipulating BAM (genome alignment) files wwwbandage
Bullseye:(0.8.1-4) Buster:(0.8.1-1) Bioinformatics Application for Navigating De novo Assembly Graphs Easily wwwbandage-examples
Bullseye:(0.8.1-4) Bioinformatics Application for Navigating De novo Assembly Graphs Easily (data) wwwbarrnap
Bullseye:(0.9+dfsg-2) Buster:(0.9+dfsg-1) rapid ribosomal RNA prediction wwwbart
Bullseye:(0.6.00-3) Buster:(0.4.04-2) tools for computational magnetic resonance imaging wwwbart-view
Bullseye:(0.1.00-4) Buster:(0.1.00-2) viewer for multi-dimensional complex-valued data wwwbbmap
Bullseye:(38.90+dfsg-1) short read aligner and other bioinformatic tools wwwbbmap-jni
Bullseye:(38.90+dfsg-1) short read aligner and other bioinformatic tools - JNI library wwwbcbio
Bullseye:(1.2.5-1) Buster:(1.1.2-3) toolkit for analysing high-throughput sequencing data wwwbcftools
Bullseye:(1.11-1) Buster:(1.9-1) genomic variant calling and manipulation of VCF/BCF files wwwbeads
Bullseye:(1.1.20-2) Buster:(1.1.18+dfsg-3) 2-DE electrophoresis gel image spot detection wwwbeagle
Bullseye:(5.1-200518+dfsg-1) Buster:(5.0-180928+dfsg-1+deb10u1) Genotype calling, genotype phasing and imputation of ungenotyped markers wwwbeast-mcmc
Bullseye:(1.10.4+dfsg-2) Buster:(1.10.4+dfsg-1) Bayesian MCMC phylogenetic inference wwwbeast2-mcmc
Bullseye:(2.6.3+dfsg-2) Buster:(2.5.1+dfsg-2) Bayesian MCMC phylogenetic inference wwwbedops
Bullseye:(2.4.39+dfsg1-2) Buster:(2.4.35+dfsg-1) high-performance genomic feature operations wwwbedtools
Bullseye:(2.30.0+dfsg-1) Buster:(2.27.1+dfsg-4) suite of utilities for comparing genomic features wwwbedtools-test
Bullseye:(2.30.0+dfsg-1) Buster:(2.27.1+dfsg-4) test data for the bedtools package wwwbelvu
Bullseye:(4.44.1+dfsg-6+b1) Buster:(4.44.1+dfsg-3) multiple sequence alignment viewer and phylogenetic tool wwwberkeley-express
Bullseye:(1.5.3+dfsg-1+b3) Buster:(1.5.2+dfsg-1+b1) Streaming quantification for high-throughput sequencing wwwbio-eagle-examples
Bullseye:(2.4.1-3) Buster:(2.4.1-1) Examples for bio-eagle wwwbio-rainbow
Bullseye:(2.0.4+dfsg-2) Buster:(2.0.4+dfsg-1) clustering and assembling short reads for bioinformatics wwwbio-vcf
Bullseye:(0.9.5-2) domain specific language (DSL) for processing the VCF format wwwbiogenesis
Bullseye:(0.8-3.1) Buster:(0.8-3) artificial life program that simulates evolution of organisms wwwbiomaj
Bullseye & Buster:(1.2.3-12) biological data-bank updater wwwbiomaj-properties
Bullseye & Buster:(1.2.3-12) biological data-bank updater - example properties files wwwbiomaj-watcher
Bullseye & Buster:(1.2.2-5) biological data-bank updater - web interface wwwbioperl
Bullseye:(1.7.7-2) Buster:(1.7.2-3) Perl tools for computational molecular biology wwwbioperl-run
Bullseye:(1.7.3-6) Buster:(1.7.2-4) BioPerl wrappers: scripts wwwbiosig-tools
Bullseye:(2.1.2-4) Buster:(1.9.3-2) format conversion tools for biomedical data formats wwwbiosquid
Bullseye:(1.9g+cvs20050121-12) Buster:(1.9g+cvs20050121-11) utilities for biological sequence analysis wwwbiosyntax
Bullseye:(1.0.0b-2) Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (metapackage) wwwbiosyntax-common
Bullseye:(1.0.0b-2) Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (common files) wwwbiosyntax-example
Bullseye:(1.0.0b-2) Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (example) wwwbiosyntax-gedit
Bullseye:(1.0.0b-2) Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (gedit) wwwbiosyntax-less
Bullseye:(1.0.0b-2) Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (less) wwwbiosyntax-vim
Bullseye:(1.0.0b-2) Buster:(1.0.0b-1) Syntax Highlighting for Computational Biology (vim) wwwbist
Bullseye:(0.5.2-1.2) Buster:(0.5.2-1.1+b2) chemical drawing tool wwwbitseq
Bullseye:(0.7.5+dfsg-5) Buster:(0.7.5+dfsg-4) Bayesian Inference of Transcripts from Sequencing Data wwwbitwise
Bullseye:(0.41-1) Interactive bitwise operation in ncurses wwwblixem
Bullseye:(4.44.1+dfsg-6+b1) Buster:(4.44.1+dfsg-3) interactive browser of sequence alignments wwwbmt
Bullseye:(0.6-1.1) Buster:(0.6-1) software analysis benchmarking toolkit wwwbodr
Bullseye:(10-2) Buster:(10-1) Blue Obelisk Data Repository wwwboinc-app-milkyway
Bullseye:(0.18d-4+b10) Buster:(0.18d-4+b7) Milkyway@home application for the BOINC client wwwboinc-app-seti
Bullseye:(8.00~svn4035-1+rpi1+b7) Buster:(8.00~svn3725-3+rpi1) SETI@home application for the BOINC client wwwboinc-app-seti-graphics
Bullseye:(8.00~svn4035-1+rpi1+b7) Buster:(8.00~svn3725-3+rpi1) SETI@home application for the BOINC client (with graphics) wwwbolt-lmm-example
Bullseye:(2.3.4+dfsg-3) Buster:(2.3.2+dfsg-3) Examples for bolt-lmm wwwboolector
Bullseye & Buster:(1.5.118.6b56be4.121013-1) SMT solver for bit-vectors and arrays wwwbowtie-examples
Bullseye:(1.3.0+dfsg1-1) Buster:(1.0.0-5) Examples for bowtie, the ultrafast memory-efficient short read aligner wwwbowtie2-examples
Bullseye:(2.4.2-2) Buster:(2.3.4.3-1) Examples for bowtie2 wwwboxshade
Bullseye:(3.3.1-14) Buster:(3.3.1-12) Pretty-printing of multiple sequence alignments wwwbppphyview
Bullseye:(0.6.1-2) Buster:(0.6.1-1) Bio++ Phylogenetic Viewer wwwbppsuite
Bullseye:(2.4.1-3) Buster:(2.4.1-1) Bio++ program suite wwwbppsuite-examples
Bullseye:(2.4.1-3) Buster:(2.4.1-1) Examples for Bio++ program suite wwwbrain2mesh-demos
Bullseye:(0.7.9-2) sample files and demo scripts for Brain2Mesh wwwbrig
Bullseye:(0.95+dfsg-3) Buster:(0.95+dfsg-2) BLAST Ring Image Generator wwwbusco
Bullseye:(5.0.0-1) benchmarking sets of universal single-copy orthologs wwwbwa
Bullseye:(0.7.17-6) Buster:(0.6.2-1) Burrows-Wheeler Aligner www- Back to top
C
c2x
Bullseye:(2.35a+ds-1) converter between DFT electronic structure codes formats wwwcafeobj
Bullseye:(1.6.0-2) Buster:(1.5.9-1) new generation algebraic specification and programming language wwwcafeobj-mode
Bullseye:(1.6.0-2) Buster:(1.5.9-1) Emacs major mode for editing CafeOBJ source code wwwcaffe
Bullseye:(1.0.0+git20180821.99bd997-8+b2) Tools for fast, open framework for Deep Learning (CPU_ONLY) wwwcalculix-ccx
Bullseye:(2.17-3) Buster:(2.11-1) Three-Dimensional Structural Finite Element Program wwwcalculix-cgx
Bullseye:(2.17+dfsg-2) Buster:(2.11+dfsg-1) Calculix cgx is a 3-dimensional pre- and post-processor for fem wwwcallisto
Bullseye:(1.1.0-2+b1) Daemon for e-Callisto hardware wwwcanu
Bullseye:(2.0+dfsg-1+b2) single molecule sequence assembler for genomes wwwcasacore-data-igrf
Bullseye & Buster:(12-1) International Geomagnetic Reference Field data for casacore wwwcasacore-data-jpl-de200
Bullseye:(2007.07.05+ds.1-1) Buster:(2007.07.05+ds.1-0+deb10u1) Jet Propulsion Laboratory Development Ephemeris DE200 for casacore wwwcasacore-data-jpl-de405
Bullseye:(2007.07.05+ds.1-1) Buster:(2007.07.05+ds.1-0+deb10u1) Jet Propulsion Laboratory Development Ephemeris DE405 for casacore wwwcasacore-data-lines
Bullseye & Buster:(0+git2016.11.26-2) Table of spectral line frequencies for casacore wwwcasacore-data-observatories
Bullseye:(0+git2018.12.08-2) Buster:(0+git2018.12.08-1) Table of radio observatory coordinates for casacore wwwcasacore-data-sources
Bullseye & Buster:(2-2) Table of ICRF reference source coordinates for casacore wwwcasacore-data-tai-utc
Bullseye:(1.3) Buster:(1.2) Difference table between TAI and UTC for casacorecasacore-tools
Bullseye:(3.3.0-4+b1) Buster:(3.0.0-4) Tools built with CASA wwwcassbeam
Bullseye:(1.1-3) Buster:(1.1-1) Cassegrain antenna modelling wwwcassiopee
Bullseye:(1.0.9-3) Buster:(1.0.9-2) index and search tool in genomic sequences wwwcat-bat
Bullseye:(5.2.2-1) taxonomic classification of contigs and metagenome-assembled genomes (MAGs) wwwcba
Bullseye:(0.3.6-5) Buster:(0.3.6-4.1+b1) Continuous Beam Analysis wwwcbflib-bin
Bullseye:(0.9.6+dfsg1-2+b2) Buster:(0.9.5.18+dfsg1-1+b1) utilities to manipulate CBF files wwwcbmc
Bullseye:(5.12-5+b1) Buster:(5.10-5) bounded model checker for C and C++ programs wwwcclib
Bullseye:(1.6.2-2) Buster:(1.6-1) Parsers and algorithms for computational chemistry wwwcclib-data
Bullseye:(1.6.2-2) Buster:(1.1-1) Parsers and algorithms for computational chemistry (data files) wwwcct
Bullseye:(1:1.0.0-1) Buster:(20170919+dfsg-1) visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences wwwcct-examples
Bullseye:(1:1.0.0-1) Buster:(20170919+dfsg-1) example data for testing the package cct wwwcd-hit
Bullseye:(4.8.1-3) Buster:(4.6.8-2) suite of programs designed to quickly group sequences wwwcdbfasta
Bullseye:(1.00+git20181005.014498c+dfsg-2) Buster:(0.99-20100722-5) Constant DataBase indexing and retrieval tools for multi-FASTA files wwwcelestia-common-nonfree
Bullseye & Buster:(1.6.1-1) Non-free datafiles for Celestia, a real-time visual space simulation wwwcentrifuge
Bullseye:(1.0.3-8) rapid and memory-efficient system for classification of DNA sequences wwwcernlib
Bullseye & Buster:(20061220+dfsg3-4.4) CERNLIB data analysis suite - general use metapackage wwwcernlib-core
Bullseye & Buster:(20061220+dfsg3-4.4) CERNLIB data analysis suite - main libraries and programs wwwcernlib-extras
Bullseye & Buster:(20061220+dfsg3-4.4) CERNLIB data analysis suite - extra programs wwwcg3
Bullseye:(1.3.2-1) Buster:(1.1.7-1+b1) Tools for using the 3rd edition of Constraint Grammar (CG-3) wwwcg3-dev
Bullseye:(1.3.2-1) Metapackage providing both CG-3 CLI dev tools and dev library wwwcgns-convert
Bullseye:(3.4.0-3) Buster:(3.3.0-7~deb10u1) CFD General Notation System - Conversion tools wwwcgview
Bullseye:(0.0.20100111-7) Buster:(0.0.20100111-4) Circular Genome Viewer wwwch5m3d
Bullseye:(1.2.5+dfsg-2.1) Buster:(1.2.5+dfsg-2) create and visualize 3-dimensional drawings of simple molecules wwwchangeo
Bullseye:(1.0.2-1) Buster:(0.4.5-1) Repertoire clonal assignment toolkit (Python 3) wwwcheckit-tiff
Bullseye & Buster:(0.2.3-2) conformance checker for baseline TIFFs wwwchemical-structures
Bullseye:(2.2.dfsg.0-18) Buster:(2.2.dfsg.0-13) web service providing molecular structures in open formatschemical-structures-data
Bullseye:(2.2.dfsg.0-18) set of molecular structures in open formatschemps2
Bullseye:(1.8.10-2) Buster:(1.8.9-1+b1) Executable to call libchemps2-3 from the command line wwwchemtool
Bullseye:(1.6.14-6+b2) Buster:(1.6.14-3+b4) chemical structures drawing program wwwchimeraslayer
Bullseye:(20101212+dfsg1-4) Buster:(20101212+dfsg1-2) detects likely chimeras in PCR amplified DNA wwwchip-seq
Bullseye:(1.5.5-3+b5) tools performing common ChIP-Seq data analysis tasks wwwchip-seq-data
Bullseye:(1.5.5-3) tools performing common ChIP-Seq data analysis tasks (data) wwwchromhmm
Bullseye:(1.21+dfsg-1) Buster:(1.18+dfsg-1) Chromatin state discovery and characterization wwwchromimpute
Bullseye:(1.0.3+dfsg-2) Buster:(1.0.3+dfsg-1) Large-scale systematic epigenome imputation wwwcif-linguist
Bullseye:(0.4.2-2) transform CIF data among CIF formats and dialects wwwcif-tools
Bullseye:(1.0.0-3) Suite of tools to manipulate, validate and query mmCIF files wwwcircos
Bullseye:(0.69.9+dfsg-2) Buster:(0.69.6+dfsg-2) plotter for visualizing data wwwcircos-tools
Bullseye & Buster:(0.23-1) plotter for visualizing data - helper utilities wwwckon
Bullseye:(0.7.1-3+b5) Buster:(0.7.1-3+b4) automatic build tool for ROOT data analysis software wwwclearcut
Bullseye:(1.0.9-6) Buster:(1.0.9-3) extremely efficient phylogenetic tree reconstruction wwwclonalframe
Bullseye:(1.2-10+b1) Buster:(1.2-9) inference of bacterial microevolution using multilocus sequence data wwwclonalframeml
Bullseye:(1.12-1) Buster:(1.11-3) Efficient Inference of Recombination in Whole Bacterial Genomes wwwclonalorigin
Bullseye:(1.0-4) Buster:(1.0-3) inference of homologous recombination in bacteria using whole genome sequences wwwclustalo
Bullseye:(1.2.4-7) Buster:(1.2.4-2) General-purpose multiple sequence alignment program for proteins wwwclustalw
Bullseye:(2.1+lgpl-7) Buster:(2.1+lgpl-6) global multiple nucleotide or peptide sequence alignment wwwclustalx
Bullseye:(2.1+lgpl-9) Buster:(2.1+lgpl-8) Multiple alignment of nucleic acid and protein sequences (graphical interface) wwwcmor-tables
Bullseye:(3.3-1.1) Buster:(3.3-1) MIP tables for the Climate Model Output Rewriter library wwwcmtk
Bullseye:(3.3.1p1+dfsg-2+b1) Buster:(3.3.1p1+dfsg-1) Computational Morphometry Toolkit wwwcod-tools
Bullseye:(3.1.0+dfsg-3) Buster:(2.3+dfsg-3) tools for manipulating CIF format files wwwcode-saturne
Bullseye:(6.0.2-2) Buster:(5.3.2+repack-1) General purpose Computational Fluid Dynamics (CFD) software wwwcode-saturne-bin
Bullseye:(6.0.2-2) Buster:(5.3.2+repack-1) General purpose Computational Fluid Dynamics (CFD) software - binaries wwwcode-saturne-data
Bullseye:(6.0.2-2) Buster:(5.3.2+repack-1) General purpose Computational Fluid Dynamics (CFD) software - data wwwcode-saturne-doc
Bullseye:(6.0.2-2) Buster:(5.3.2+repack-1) General purpose Computational Fluid Dynamics (CFD) software - Documentation wwwcode-saturne-include
Bullseye:(6.0.2-2) Buster:(5.3.2+repack-1) General purpose Computational Fluid Dynamics (CFD) software - includes wwwcodonw
Bullseye:(1.4.4-6) Buster:(1.4.4-4) Correspondence Analysis of Codon Usage wwwcoinor-cbc
Bullseye:(2.10.5+ds1-3) Buster:(2.9.9+repack1-1) Coin-or branch-and-cut mixed integer programming solver wwwcoinor-clp
Bullseye:(1.17.5+repack1-1) Buster:(1.16.11+repack1-1) Coin-or linear programming solver wwwcoinor-csdp
Bullseye:(6.2.0-3) Buster:(6.1.1-1+b1) Software package for semidefinite programming (binaries) wwwcoinor-libcbc3
Bullseye:(2.10.5+ds1-3) Buster:(2.9.9+repack1-1) Coin-or branch-and-cut mixed integer programming solver (shared libraries) wwwcoinor-libcgl1
Bullseye:(0.60.3+repack1-2) Buster:(0.59.10+repack1-1) COIN-OR Cut Generation Library wwwcoinor-libclp1
Bullseye:(1.17.5+repack1-1) Buster:(1.16.11+repack1-1) Coin-or linear programming solver (shared libraries) wwwcoinor-libcoinutils3v5
Bullseye:(2.11.4+repack1-1) Buster:(2.10.14+repack1-1) Coin-or collection of utility classes (binaries and libraries) wwwcoinor-libflopc++0
Bullseye & Buster:(1.0.6-3.1+b2) Formulation of Linear Optimization Problems in C++ wwwcoinor-libosi1v5
Bullseye:(0.108.6+repack1-2) Buster:(0.107.9+repack1-1) COIN-OR Open Solver Interface wwwcoinor-libsymphony3
Bullseye:(5.6.16+repack1-3) Buster:(5.6.16+repack1-1.1) COIN-OR solver for mixed-integer linear programs (shared libraries) wwwcoinor-libvol1
Bullseye:(1.5.4-4) Coin-or linear programming solver (libraries) wwwcoinor-symphony
Bullseye:(5.6.16+repack1-3) Buster:(5.6.16+repack1-1.1) COIN-OR solver for mixed-integer linear programs wwwcomet-ms
Bullseye:(2019015+cleaned1-3) Buster:(2018012-1) Tandem mass spectrometry (MS/MS) search engine wwwconcavity
Bullseye:(0.1+dfsg.1-5) Buster:(0.1+dfsg.1-4) predictor of protein ligand binding sites from structure and conservation wwwconda-package-handling
Bullseye:(1.7.2-2) create and extract conda packages of various formats wwwconnectome-workbench
Bullseye:(1.5.0-1) Buster:(1.3.2-1) brain visualization, analysis and discovery tool wwwconservation-code
Bullseye:(20110309.0-8) Buster:(20110309.0-7) protein sequence conservation scoring tool wwwcovtobed
Bullseye:(1.2.0+dfsg-1+b2) convert the coverage track from a BAM file into a BED file wwwcovtobed-examples
Bullseye:(1.2.0+dfsg-1) example data and scripts for mindthegap wwwcp2k
Bullseye:(8.1-9) Buster:(6.1-2) Ab Initio Molecular Dynamics wwwcp2k-data
Bullseye:(8.1-9) Buster:(6.1-2) Ab Initio Molecular Dynamics (data files) wwwcpl-plugin-amber
Bullseye:(4.4.0+dfsg-4) Buster:(4.3.8+dfsg-1+b1) ESO data reduction pipeline for the AMBER instrument wwwcpl-plugin-amber-calib
Bullseye:(4.4.0+dfsg-4) Buster:(4.3.8+dfsg-1) ESO data reduction pipeline calibration data downloader for AMBER wwwcpl-plugin-fors
Bullseye:(5.5.6+dfsg-4) Buster:(5.3.32+dfsg-1) ESO data reduction pipeline for the FORS1/2 instruments wwwcpl-plugin-fors-calib
Bullseye:(5.5.6+dfsg-4) Buster:(5.3.32+dfsg-1) ESO data reduction pipeline calibration data downloader for FORS2 wwwcpl-plugin-giraf
Bullseye:(2.16.7+dfsg-4) Buster:(2.16.3+dfsg-1+b1) ESO data reduction pipeline for the GIRAFFE instrument wwwcpl-plugin-giraf-calib
Bullseye:(2.16.7+dfsg-4) Buster:(2.16.3+dfsg-1) ESO data reduction pipeline calibration data downloader for GIRAFFE wwwcpl-plugin-hawki
Bullseye:(2.4.8+dfsg-4) Buster:(2.4.3+dfsg-1) ESO data reduction pipeline for the HAWK-I instrument wwwcpl-plugin-hawki-calib
Bullseye:(2.4.8+dfsg-4) Buster:(2.4.3+dfsg-1) ESO data reduction pipeline calibration data downloader for HAWK-I wwwcpl-plugin-kmos
Bullseye & Buster:(2.1.0+dfsg-1) ESO data reduction pipeline for the KMOS instrument wwwcpl-plugin-kmos-calib
Bullseye & Buster:(2.1.0+dfsg-1) ESO data reduction pipeline calibration data downloader for KMOS wwwcpl-plugin-muse
Bullseye:(2.8.3+dfsg-4) Buster:(2.6+dfsg-1) ESO data reduction pipeline for the MUSE instrument wwwcpl-plugin-muse-calib
Bullseye:(2.8.3+dfsg-4) Buster:(2.6+dfsg-1) ESO data reduction pipeline calibration data downloader for MUSE wwwcpl-plugin-naco
Bullseye:(4.4.9+dfsg-4) Buster:(4.4.6+dfsg-1) ESO data reduction pipeline for the NaCo instrument wwwcpl-plugin-naco-calib
Bullseye:(4.4.9+dfsg-4) Buster:(4.4.6+dfsg-1) ESO data reduction pipeline NaCo calibration data downloader wwwcpl-plugin-uves
Bullseye:(6.1.3+dfsg-5) Buster:(5.9.1+dfsg-1+b1) ESO data reduction pipeline for the UVES instrument wwwcpl-plugin-uves-calib
Bullseye:(6.1.3+dfsg-5) Buster:(5.9.1+dfsg-1) ESO data reduction pipeline calibration data downloader for UVES wwwcpl-plugin-vimos
Bullseye:(4.1.1+dfsg-4) Buster:(3.2.3+dfsg-2+b1) ESO data reduction pipeline for the VIMOS instrument wwwcpl-plugin-vimos-calib
Bullseye:(4.1.1+dfsg-4) Buster:(3.2.3+dfsg-2) ESO data reduction pipeline calibration data downloader for VIMOS wwwcpl-plugin-visir
Bullseye:(4.3.10+dfsg-5) Buster:(4.3.7+dfsg-1+b1) ESO data reduction pipeline for the VISIR instrument wwwcpl-plugin-visir-calib
Bullseye:(4.3.10+dfsg-5) Buster:(4.3.7+dfsg-1) ESO data reduction pipeline calibration data downloader for VISIR wwwcpl-plugin-xshoo
Bullseye:(3.5.0+dfsg-4) Buster:(3.2.0+dfsg-1+b1) ESO data reduction pipeline for the XSHOOTER instrument wwwcpl-plugin-xshoo-calib
Bullseye:(3.5.0+dfsg-4) Buster:(3.2.0+dfsg-1) ESO data reduction pipeline calibration data downloader for XSHOOTER wwwcpuinfo
Bullseye:(0.0~git20200612.63b2545-2) Buster:(0.0~git20190201.d5e37ad-1) CPU INFOrmation library (binary utilities) wwwcrac
Bullseye:(2.5.2+dfsg-4) integrated RNA-Seq read analysis wwwcritterding
Bullseye & Buster:(1.0-beta12.1-1.3) Evolving Artificial Life wwwctdconverter
Bullseye:(2.1-3) Buster:(2.0-4) Convert CTD files into Galaxy tool and CWL CommandLineTool files wwwctsim
Bullseye:(6.0.2-5) Buster:(6.0.2-2) Computed tomography simulator wwwctsim-help
Bullseye:(6.0.2-5) Buster:(6.0.2-2) Online help file for CTSim wwwcutadapt
Bullseye:(3.2-2) Buster:(1.18-1) Clean biological sequences from high-throughput sequencing reads wwwcwlformat
Bullseye:(2021.01.05-1) code formatter for Common Workflow Language wwwcwltool
Bullseye:(3.0.20210124104916-3+deb11u1) Buster:(1.0.20181217162649+dfsg-10) Common Workflow Language reference implementation www- Back to top
D
daligner
Bullseye:(1.0+git20200727.ed40ce5-3) Buster:(1.0+git20180524.fd21879-1) local alignment discovery between long nucleotide sequencing reads wwwdamapper
Bullseye:(0.0+git20200322.b2c9d7f-3) long read to reference genome mapping tool wwwdans-gdal-scripts
Bullseye:(0.24-3+b4) Buster:(0.24-3+b1) GDAL contributed tools by Geographic Information Network of Alaska wwwdarknet
Bullseye:(0.0.0+git20180914.61c9d02e-2+b5) Buster:(0.0.0+git20180914.61c9d02e-1) Open Source Neural Networks in C wwwdascrubber
Bullseye:(1.1-2) Buster:(1.1-1) alignment-based scrubbing pipeline for DNA sequencing reads wwwdatalad
Bullseye:(0.14.0-1) Buster:(0.11.2-2) data files management and distribution platform wwwdatalad-container
Bullseye:(1.1.2-1) Buster:(0.2.2-2) DataLad extension for working with containerized environments wwwdawg
Bullseye:(1.2-3) Buster:(1.2-2) simulate the evolution of recombinant DNA sequences wwwdazzdb
Bullseye:(1.0+git20201103.8d98c37-1+deb11u1) Buster:(1.0+git20180908.0bd5e07-1) manage nucleotide sequencing read data wwwdcl-f77
Bullseye:(7.4.1-1) Buster:(7.3.3-1) GFD-DENNOU Club Library (DCL) - FORTRAN77 version wwwdcm2niix
Bullseye:(1.0.20201102-1) Buster:(1.0.20181125-1) next generation DICOM to NIfTI converter wwwdcmtk
Bullseye:(3.6.5-1) Buster:(3.6.4-2.1) OFFIS DICOM toolkit command line utilities wwwdebian-astro-logo
Bullseye:(3.0) Buster:(2.0) Debian Astronomy Pure Blends Logo wwwdeepnano
Bullseye:(0.0+git20170813.e8a621e-3.1+b9) alternative basecaller for MinION reads of genomic sequences wwwdeepnano-data
Bullseye:(0.0+git20170813.e8a621e-3.1) Buster:(0.0+git20170813.e8a621e-3) alternative basecaller for MinION reads of genomic sequences (data) wwwdelly
Bullseye:(0.8.7-1) Buster:(0.8.1-2) Structural variant discovery by read analysis wwwdensity-fitness
Bullseye:(1.0.0-2) Calculates per-residue electron density scores wwwdextractor
Bullseye:(1.0-4) (d)extractor and compression command library wwwdh-r
Bullseye:(20210303) Buster:(20190121) Debian helper tools for packaging R librariesdialign
Bullseye:(2.2.1-11) Buster:(2.2.1-10) Segment-based multiple sequence alignment wwwdialign-tx
Bullseye:(1.0.2-13) Buster:(1.0.2-12) Segment-based multiple sequence alignment wwwdialign-tx-data
Bullseye:(1.0.2-13) Buster:(1.0.2-12) Segment-based multiple sequence alignment (data files) wwwdiamond-aligner
Bullseye:(0.9.30-3) Buster:(0.9.22+dfsg-2) accelerated BLAST compatible local sequence aligner wwwdicomnifti
Bullseye:(2.33.1-2) Buster:(2.33.1-1) converts DICOM files into the NIfTI format wwwdicompyler
Bullseye:(0.4.2.0+git20200106.2643e0e-1) Buster:(0.4.2.0-2) radiation therapy research platform wwwdimbl
Bullseye:(0.15-2.1+b2) Buster:(0.15-2.1) Distributed Memory Based Learner wwwdindel
Bullseye:(1.01-wu1-3+dfsg-2) Buster:(1.01-wu1-3+dfsg-1) determines indel calls from short-read data wwwdisulfinder
Bullseye:(1.2.11-10) Buster:(1.2.11-8) cysteines disulfide bonding state and connectivity predictor wwwdisulfinder-data
Bullseye:(1.2.11-10) Buster:(1.2.11-8) data files for predictor of disulfide bonds in proteins wwwdlmodelbox
Bullseye:(1.1.1-1) Buster:(0.1.3-1) Swiss Army Knife of Deep Learning Models wwwdnaclust
Bullseye:(3-7+b1) Buster:(3-6) tool for clustering millions of short DNA sequences wwwdnapi
Bullseye:(1.1-3) adapter prediction for small RNA sequencing - utils wwwdotter
Bullseye:(4.44.1+dfsg-6+b1) Buster:(4.44.1+dfsg-3) detailed comparison of two genomic sequences wwwdotur
Bullseye & Buster:(1.53-2) distance based OTU and richness estimation wwwdozzaqueux
Bullseye:(3.51-2.1) Buster:(3.51-2) simulator for chemical mixtures wwwdozzaqueux-data
Bullseye:(3.51-2.1) Buster:(3.51-2) databases for chemical mixtures wwwdpuser
Bullseye:(4.0+dfsg-3+b2) Buster:(3.3+p1+dfsg-2+b1) Interactive language for handling numbers, strings, and matrices wwwdrawxtl
Bullseye:(5.5-5) Buster:(5.5-3+b2) crystal structure viewer wwwdrop-seq-testdata
Bullseye:(2.4.0+dfsg-6) analyzing Drop-seq data (testdata) wwwdrop-seq-tools
Bullseye:(2.4.0+dfsg-6) analyzing Drop-seq data wwwdrslib
Bullseye:(0.3.1.p3-2) Buster:(0.3.1.p3-1) Command-line tools for the Data Reference Syntax library wwwdsdp
Bullseye & Buster:(5.8-9.4) Software for Semidefinite Programming wwwdssp
Bullseye:(4.0.0-2) Buster:(3.0.0-3) protein secondary structure assignment based on 3D structure wwwdwgsim
Bullseye:(0.1.12-4) Buster:(0.1.12-2) short sequencing read simulator wwwdx
Bullseye:(1:4.4.4-13) Buster:(1:4.4.4-12) OpenDX (IBM Visualization Data Explorer) - main package wwwdxf2gcode
Bullseye & Buster:(20170925-4) prepares drawings of parts for automatic machine tools wwwdxsamples
Bullseye:(4.4.0-5) Buster:(4.4.0-4) Sample programs for the OpenDX Data Explorer www- Back to top
E
e-mem
Bullseye:(1.0.1-4) Buster:(1.0.1-2) Efficient computation of Maximal Exact Matches for very large genomes wwwe00compr
Bullseye:(1.0.1-6) Buster:(1.0.1-5) Program to read/write Arcinfo compressed E00 files wwwea-utils
Bullseye:(1.1.2+dfsg-6) Buster:(1.1.2+dfsg-5) command-line tools for processing biological sequencing data wwweasychem
Bullseye:(0.6-9) Buster:(0.6-8) Draw high-quality molecules and 2D chemical formulas wwwecaccess
Bullseye:(4.0.1-1.1) Buster:(4.0.1-1) clients to access ECMWF facilities wwwecflow-client
Bullseye:(5.6.0-1+b1) Buster:(4.12.0-1) Client tools for Meteorological workflow wwwecflow-server
Bullseye:(5.6.0-1+b1) Buster:(4.12.0-1) Meteorological workflow controller - server wwwecopcr
Bullseye:(1.0.1+dfsg-2) Buster:(1.0.1+dfsg-1) estimate PCR barcode primers quality wwwedfbrowser
Bullseye:(1.81+dfsg-1) Buster:(1.67+dfsg-1) viewer for biosignal storage files such as bdf and edf wwwedlib-aligner
Bullseye:(1.2.6-1) Buster:(1.2.4-1) edlib sequence alignment tool using edit distance wwwedtsurf
Bullseye:(0.2009-10) Buster:(0.2009-6) triangulated mesh surfaces for protein structures wwweigensoft
Bullseye:(7.2.1+dfsg-2) Buster:(7.2.1+dfsg-1+b1) reduction of population bias for genetic analyses wwwelk-lapw
Bullseye:(6.3.2-2) Buster:(5.4.24-2) All-Electron Density-Functional Electronic Structure Code wwwelki
Bullseye & Buster:(0.7.1-10.1) Data mining algorithm development framework wwwelki-dev
Bullseye & Buster:(0.7.1-10.1) Data mining algorithm development framework - development files wwwelph
Bullseye:(1.0.1-5) Buster:(1.0.1-2) DNA/protein sequence motif finder wwwembassy-domainatrix
Bullseye:(0.1.660-4) Buster:(0.1.660-3) Extra EMBOSS commands to handle domain classification file wwwembassy-domalign
Bullseye:(0.1.660-4) Buster:(0.1.660-3) Extra EMBOSS commands for protein domain alignment wwwembassy-domsearch
Bullseye & Buster:(1:0.1.660-3) Extra EMBOSS commands to search for protein domains wwwemboss
Bullseye:(6.6.0+dfsg-9) Buster:(6.6.0+dfsg-7+b1) European molecular biology open software suite wwwemboss-data
Bullseye:(6.6.0+dfsg-9) Buster:(6.6.0+dfsg-7) data files for the EMBOSS package wwwemboss-explorer
Bullseye:(2.2.0-11) Buster:(2.2.0-10) web-based GUI to EMBOSS wwwemboss-lib
Bullseye:(6.6.0+dfsg-9) Buster:(6.6.0+dfsg-7+b1) EMBOSS Libraries wwwemmax
Bullseye:(0~beta.20100307-1) genetic mapping considering population structure wwwengauge-digitizer
Bullseye:(12.1+ds.1-1) Buster:(10.10+ds.1-1) interactively extracts numbers from bitmap graphs or maps wwwent
Bullseye:(1.2debian-3) Buster:(1.2debian-2) pseudorandom number sequence test program wwwepigrass
Bullseye:(3.0.0+dfsg-1) Buster:(2.4.7-2+b31) scientific tool for simulations and scenario analysis in network epidemiology wwwepsilon-bin
Bullseye:(0.9.2+dfsg-5) Buster:(0.9.2+dfsg-4) Library for wavelet image compression - tools wwwergo
Bullseye:(3.8-1) Buster:(3.5-1) Quantum chemistry program for large-scale calculations wwwergo-data
Bullseye:(3.8-1) Quantum chemistry program for large-scale calculations - data package wwweso-midas
Bullseye:(19.02pl1.1-6) Buster:(19.02pl1.0-1) European Southern Observatory Munich Image Data Analysis System wwweso-midas-testdata
Bullseye:(19.02pl1.1-6) Buster:(19.02pl1.0-1) Test data files for ESO-MIDAS wwweso-pipelines
Bullseye:(1.3) Buster:(1.2) ESO VLT Instrument pipeline collection wwwesorex
Bullseye:(3.13.3+ds-1) Buster:(3.13.1-1+deb10u1) Execution Tool for European Southern Observatory pipelines wwwestscan
Bullseye:(3.0.3-5) Buster:(3.0.3-3) ORF-independent detector of coding DNA sequences wwwesys-particle
Bullseye:(2.3.5+dfsg2-1) Buster:(2.3.5+dfsg1-2.1) Software for particle-based numerical modelling (MPI version) wwwetsf-io
Bullseye:(1.0.4-5) Buster:(1.0.4-4) Binary tools to check, merge and read ETSF files wwwexaml
Bullseye:(3.0.22-1) Exascale Maximum Likelihood (ExaML) code for phylogenetic inference wwwexonerate
Bullseye:(2.4.0-5) Buster:(2.4.0-4) generic tool for pairwise sequence comparison wwwexpeyes
Bullseye:(4.8.8+repack-2) Buster:(4.4.4+dfsg-4) hardware & software framework for developing science experiments wwwexpeyes-clib
Bullseye:(4.8.8+repack-2) Buster:(4.4.4+dfsg-4) hardware & software framework for developing science experiments wwweye
Bullseye:(20.1027.2307~ds-1) Buster:(19.0221.2026~ds-1) semantic web reasoning engine wwweyes17
Bullseye:(4.8.8+repack-2) Buster:(4.4.4+dfsg-4) hardware & software framework for developing science experiments www- Back to top
F
fact++
Bullseye:(1.6.5~dfsg-3) Buster:(1.6.5~dfsg-2) description logic reasoner for the semantic web wwwfast5
Bullseye:(0.6.5-4) Buster:(0.6.5-2) utilities for manipulating Oxford Nanopore Fast5 files wwwfasta3
Bullseye:(36.3.8h.2020-02-11-3) tools for searching collections of biological sequences wwwfastahack
Bullseye:(1.0.0+dfsg-7) Buster:(0.0+git20160702.bbc645f+dfsg-6) utility for indexing and sequence extraction from FASTA files wwwfastaq
Bullseye:(3.17.0-3) Buster:(3.17.0-2) FASTA and FASTQ file manipulation tools wwwfastdnaml
Bullseye:(1.2.2-15) Buster:(1.2.2-14) Tool for construction of phylogenetic trees of DNA sequences wwwfastlink
Bullseye:(4.1P-fix100+dfsg-4) Buster:(4.1P-fix100+dfsg-2) faster version of pedigree programs of Linkage wwwfastml
Bullseye:(3.11-3) Buster:(3.1-4) maximum likelihood ancestral amino-acid sequence reconstruction wwwfastp
Bullseye:(0.20.1+dfsg-1) Buster:(0.19.6+dfsg-1) Ultra-fast all-in-one FASTQ preprocessor wwwfastqc
Bullseye:(0.11.9+dfsg-4) Buster:(0.11.8+dfsg-2) quality control for high throughput sequence data wwwfastqtl
Bullseye:(2.184+dfsg-7+b4) Buster:(2.184+dfsg-6) Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes wwwfasttext
Bullseye:(0.9.2-3+b1) Efficient learning of word representations and sentence classification library wwwfasttree
Bullseye:(2.1.11-2) Buster:(2.1.10-2) phylogenetic trees from alignments of nucleotide or protein sequences wwwfastx-toolkit
Bullseye & Buster:(0.0.14-6) FASTQ/A short nucleotide reads pre-processing tools wwwfeedgnuplot
Bullseye:(1.57-1) Buster:(1.51-1) Pipe-oriented frontend to Gnuplot wwwffindex
Bullseye:(0.9.9.9-4) Buster:(0.9.9.9-2) simple index/database for huge amounts of small files wwwfigtree
Bullseye:(1.4.4-5) Buster:(1.4.4-3) graphical phylogenetic tree viewer wwwfilo
Bullseye & Buster:(1.1.0-3) FILe and stream Operations wwwfiltlong
Bullseye:(0.2.0-2) quality filtering tool for long reads of genome sequences wwwfiltlong-data
Bullseye:(0.2.0-2) quality filtering tool for long reads of genome sequences (testdata) wwwfiona
Bullseye:(1.8.18-1+b1) Buster:(1.8.4-1+b1) Command line tool for reading/writing vector geospatial data wwwfirm-phoenix-ware
Bullseye:(4.7.5+repack-1) firmware necessary for boxes issued by project PHOENIX wwwfitgcp
Bullseye:(0.0.20150429-4) Buster:(0.0.20150429-2) fitting genome coverage distributions with mixture models wwwfitscut
Bullseye:(1.4.4-5+b2) Buster:(1.4.4-4+b3) Extract cutouts from FITS image format files wwwfitsh
Bullseye:(0.9.4-1) Buster:(0.9.2-1) Software package for astronomical image processing wwwfitspng
Bullseye:(1.4-1+b2) Buster:(1.4-1) FITS to PNG converter wwwfitsverify
Bullseye:(4.20-3) Buster:(4.19-1+b1) FITS File Format-Verification Tool wwwfityk
Bullseye:(1.3.1-6) Buster:(1.3.1-3) general-purpose nonlinear curve fitting and data analysis wwwflash
Bullseye:(1.2.11-2) Fast Length Adjustment of SHort reads wwwflexbar
Bullseye:(1:3.5.0-3) Buster:(1:3.4.0-2) flexible barcode and adapter removal for sequencing platforms wwwflexpart
Bullseye:(9.02-23) Buster:(9.02-21) Particle Dispersion model for tracing air transport phenomena wwwflextra
Bullseye:(5.0-14) Buster:(5.0-12) Trajectory model for tracing air transport phenomena wwwfml-asm
Bullseye:(0.1+git20190320.b499514-1+rpi1) tool for assembling Illumina short reads in small regions wwwfoma
Bullseye:(1:0.9.18+r243-8) Tools for constructing various finite-state automata wwwfoma-bin
Bullseye:(1:0.9.18+r243-8) Buster:(0.9.18+r243-1+b1) Transitional package for foma wwwform
Bullseye:(4.2.1+git20200217-1) Buster:(4.2.1-1) Symbolic manipulation system wwwfractalnow
Bullseye:(0.8.2-4) Buster:(0.8.2-2) Fast, advanced fractal generator wwwfree42-nologo
Bullseye:(2.5.25+ds-1) Buster:(1.4.77-1.2) Free42 is a re-implementation of the HP-42S calculator wwwfreebayes
Bullseye:(1.3.5-1) Bayesian haplotype-based polymorphism discovery and genotyping wwwfreecad
Bullseye:(0.19.1+dfsg1-2+deb11u1) Buster:(0.18~pre1+dfsg1-5+rpi1) Extensible Open Source CAx program wwwfreecad-common
Bullseye:(0.19.1+dfsg1-2+deb11u1) Buster:(0.18~pre1+dfsg1-5+rpi1) Extensible Open Source CAx program - common files wwwfreecad-python3
Bullseye:(0.19.1+dfsg1-2+deb11u1) Buster:(0.18~pre1+dfsg1-5+rpi1) Extensible Open Source CAx program - Python 3 binaries wwwfreecontact
Bullseye:(1.0.21-9) Buster:(1.0.21-7) fast protein contact predictor wwwfrog
Bullseye:(0.20-2+b1) Buster:(0.15-1) tagger and parser for natural languages (runtime) wwwfrogdata
Bullseye:(0.18-1) Buster:(0.16-1) Data files for Frog wwwfsa
Bullseye:(1.15.9+dfsg-6) Buster:(1.15.9+dfsg-4) Fast Statistical Alignment of protein, RNA or DNA sequences wwwfsl
Bullseye & Buster:(5.0.8-6) transitional dummy package wwwfsl-core
Bullseye & Buster:(5.0.8-6) metapackage for the latest version of FSL wwwftools-fv
Bullseye:(5.5.2+dfsg-1) Buster:(5.5+dfsg-2) Tool for viewing and editing FITS format files wwwftools-pow
Bullseye:(5.5.2+dfsg-1) Buster:(5.5+dfsg-2) Curve plotting and image display interface tool wwwfuntools
Bullseye & Buster:(1.4.7-4) Minimal buy-in FITS utility package wwwfxt-tools
Bullseye:(0.3.13-1) Buster:(0.3.8-2) Multithreaded tracing library www- Back to top
G
g3data
Bullseye:(1:1.5.3-3+b1) Buster:(1:1.5.3-2.1) extract data from scanned graphs wwwgabedit
Bullseye:(2.5.1~20200828-1) Buster:(2.4.8-3+b1) graphical user interface to Ab Initio packages wwwgalileo
Bullseye:(0.5.1-7) Buster:(0.5.1-6) Utility to securely synchronize a Fitbit device with the Fitbit web service wwwgalileo-daemon
Bullseye:(0.5.1-7) Buster:(0.5.1-6) Utility to securely synchronize a Fitbit device - daemon wwwgamgi
Bullseye:(0.17.3-3) Buster:(0.17.3-2) General Atomistic Modelling Graphic Interface (GAMGI) wwwgamgi-data
Bullseye:(0.17.3-3) Buster:(0.17.3-2) General Atomistic Modelling Graphic Interface (data) wwwgarli
Bullseye:(2.1-4) Buster:(2.1-3) phylogenetic analysis of molecular sequence data using maximum-likelihood wwwgarli-examples
Bullseye:(2.1-4) Buster:(2.1-3) phylogenetic analysis of molecular sequence data (examples) wwwgarli-mpi
Bullseye:(2.1-4) Buster:(2.1-3) phylogenetic analysis of molecular sequence data using maximum-likelihood (MPI) wwwgarlic
Bullseye & Buster:(1.6-3) visualization program for biomolecules wwwgasic
Bullseye:(0.0.r19-7) genome abundance similarity correction wwwgasic-examples
Bullseye:(0.0.r19-7) genome abundance similarity correction (example data) wwwgatb-core-testdata
Bullseye:(1.4.2+dfsg-6) Buster:(1.4.1+git20181225.44d5a44+dfsg-3) Genome Analysis Toolbox with de-Bruijn graph (test data) wwwgausssum
Bullseye:(3.0.2-2) Buster:(3.0.2-1) parse and display Gaussian, GAMESS, and etc's output wwwgazebo-common
Bullseye:(11.1.0+dfsg-6) Open Source Robotics Simulator - Shared files wwwgazebo9
Bullseye:(11.1.0+dfsg-6) transitional package wwwgazebo9-common
Bullseye:(11.1.0+dfsg-6) Buster:(9.6.0-1) transitional package wwwgazebo9-plugin-base
Bullseye:(11.1.0+dfsg-6) transitional package wwwgbrowse
Bullseye:(2.56+dfsg-8) Buster:(2.56+dfsg-4) GMOD Generic Genome Browser wwwgbrowse-calign
Bullseye:(2.56+dfsg-8+b1) Buster:(2.56+dfsg-4+b1) CAlign helper wwwgbrowse-data
Bullseye:(2.56+dfsg-8) Buster:(2.56+dfsg-4) Sample data to use GBrowse wwwgbutils
Bullseye:(6.0-1) Buster:(5.7.1-1) utilities for command line econometrics wwwgchempaint
Bullseye:(0.14.17-6) Buster:(0.14.17-1.1) 2D chemical structures editor for the GNOME2 desktop wwwgcrystal
Bullseye:(0.14.17-6) Buster:(0.14.17-1.1) lightweight crystal structures visualizer wwwgcu-bin
Bullseye:(0.14.17-6) Buster:(0.14.17-1.1) GNOME chemistry utils (helper applications) wwwgcx
Bullseye:(1.3-1.1+b2) Buster:(1.3-1.1) astronomical image processing and photometry gtk+ application wwwgdal-bin
Bullseye:(3.2.2+dfsg-2+deb11u2) Buster:(2.4.0+dfsg-1+deb10u1) Geospatial Data Abstraction Library - Utility programs wwwgdal-data
Bullseye:(3.2.2+dfsg-2+deb11u2) Buster:(2.4.0+dfsg-1+deb10u1) Geospatial Data Abstraction Library - Data files wwwgdis
Bullseye:(0.90-6) Buster:(0.90-5) molecular and crystal model viewer wwwgdis-data
Bullseye:(0.90-6) Buster:(0.90-5) molecular and crystal model viewer (data files) wwwgdl-astrolib
Bullseye:(2020.10.29+dfsg-3) Buster:(2018.08.10+dfsg-1) Low-level astronomy software for GDL wwwgdl-coyote
Bullseye:(2019.08.19-1) Buster:(2019.01.29-1) GDL library from D. Fannings IDL courses wwwgdl-mpfit
Bullseye:(1.85+2017.01.03-4) Buster:(1.85+2017.01.03-3) Robust non-linear least squares curve fitting for GDL wwwgdpc
Bullseye:(2.2.5-11) Buster:(2.2.5-9) visualiser of molecular dynamic simulations wwwgdpc-examples
Bullseye:(2.2.5-11) Buster:(2.2.5-9) example files for the gdpc program wwwgelemental
Bullseye:(2.0.0-1) Buster:(1.2.0-12) Periodic Table viewer wwwgemma
Bullseye:(0.98.4+dfsg-4) Buster:(0.98.1+dfsg-1) Genome-wide Efficient Mixed Model Association wwwgemma-doc
Bullseye:(0.98.4+dfsg-4) Buster:(0.98.1+dfsg-1) Example folder for GEMMA wwwgenometester
Bullseye:(4.0+git20200511.91cecb5+dfsg-1) Buster:(4.0+git20180508.a9c14a6+dfsg-1) toolkit for performing set operations on k-mer lists wwwgenomethreader
Bullseye:(1.7.3+dfsg-5) software tool to compute gene structure predictions wwwgenometools
Bullseye:(1.6.1+ds-3) Buster:(1.5.10+ds-3) versatile genome analysis toolkit wwwgenometools-common
Bullseye:(1.6.1+ds-3) Buster:(1.5.10+ds-3) shared data files for GenomeTools wwwgentle
Bullseye:(1.9+cvs20100605+dfsg1-9) Buster:(1.9+cvs20100605+dfsg1-7+b1) suite to plan genetic cloning wwwgeographiclib-tools
Bullseye:(1.51-1) Buster:(1.49-4) C++ library to solve some geodesic problems -- tools wwwgeotiff-bin
Bullseye:(1.6.0-1) Buster:(1.4.3-1) GeoTIFF (geografic enabled TIFF) library -- tools wwwgerris
Bullseye:(20131206+dfsg-19+b7) Buster:(20131206+dfsg-18+b27) Fluid Flow Solver wwwgetdata
Bullseye:(0.2-4) Buster:(0.2-3) management of external databases wwwgff2aplot
Bullseye:(2.0-13) Buster:(2.0-11) pair-wise alignment-plots for genomic sequences in PostScript wwwgff2ps
Bullseye:(0.98l-4) Buster:(0.98l-2) produces PostScript graphical output from GFF-files wwwgffread
Bullseye:(0.12.1-4) GFF/GTF format conversions, region filtering, FASTA sequence extraction wwwgfsview
Bullseye:(20121130+dfsg-7) Buster:(20121130+dfsg-6) graphical viewer for Gerris simulation files wwwgfsview-batch
Bullseye:(20121130+dfsg-7) Buster:(20121130+dfsg-6) batch-version of viewer for Gerris simulation files wwwgftl-dev
Bullseye:(1.3.0+is-really-1.2.7-1) Containers and iterators for Fortran wwwgftl-shared-dev
Bullseye:(1.0.7-2) Common gFTL containers of Fortran intrinsic types wwwggd-utils
Bullseye:(0.0.7+ds-3) programs for use in ggd wwwghkl
Bullseye:(5.0.0.2661-1+b1) Buster:(5.0.0.2456-1) diffractometer computation control application wwwghmm
Bullseye:(0.9~rc3-4) Buster:(0.9~rc3-2) General Hidden-Markov-Model library - tools wwwgiella-core
Bullseye:(0.1.1~r129227+svn121148-2.1) Buster:(0.1.1~r129227+svn121148-2) GTCORE files for building Giellatekno language packages wwwgiella-sme
Bullseye & Buster:(0.0.20150917~r121176-3) Giellatekno single language data for North Saami wwwgiella-sme-dev
Bullseye & Buster:(0.0.20150917~r121176-3) Giellatekno single language data for North Saami (dev extras) wwwginga
Bullseye:(3.1.0-1) Buster:(2.7.2-2) Astronomical image viewer wwwglam2
Bullseye:(1064-9) Buster:(1064-5) gapped protein motifs from unaligned sequences wwwgliese
Bullseye & Buster:(3.0.95-2) stellar data set from the Third Catalogue of Nearby Stars wwwglueviz
Bullseye:(1.0.1+dfsg-1) Buster:(0.14.1+dfsg-1) Linked data visualization wwwgmap
Bullseye:(2021-02-22+ds-1) spliced and SNP-tolerant alignment for mRNA and short reads wwwgmt
Bullseye:(6.1.1+dfsg-1+b1) Buster:(5.4.5+dfsg-2) Generic Mapping Tools wwwgmt-common
Bullseye:(6.1.1+dfsg-1) Buster:(5.4.5+dfsg-2) Generic Mapping Tools - Architecture-independent files wwwgmt-dcw
Bullseye:(1.1.4-3) Buster:(1.1.4-2) Digital Chart of the World (DCW) for GMT wwwgmt-gshhg
Bullseye:(2.3.7-5) Buster:(2.3.7-4) Global Self-consistent Hierarchical High-resolution Geography (GSHHG) wwwgmt-gshhg-full
Bullseye:(2.3.7-5) Buster:(2.3.7-4) Full resolution coastlines for the Generic Mapping Tools wwwgmt-gshhg-high
Bullseye:(2.3.7-5) Buster:(2.3.7-4) High resolution coastlines for the Generic Mapping Tools wwwgmt-gshhg-low
Bullseye:(2.3.7-5) Buster:(2.3.7-4) Low resolution coastlines for the Generic Mapping Tools wwwgnuastro
Bullseye:(0.14-1) Buster:(0.8-1) GNU Astronomy Utilities programs wwwgpaw
Bullseye:(21.1.0-1) Buster:(1.5.1-1) DFT and beyond within the projector-augmented wave method wwwgpaw-data
Bullseye & Buster:(0.9.20000-2) gpaw datasets/setups wwwgperiodic
Bullseye & Buster:(3.0.3-1) periodic table application wwwgpx
Bullseye:(2.6.8-1) Buster:(2.5.2-3) Gcode to x3g conversion post processor wwwgrabix
Bullseye:(0.1.7-2) Buster:(0.1.7-1) wee tool for random access into BGZF files wwwgraphlan
Bullseye:(1.1.3-2) Buster:(1.1.3-1) circular representations of taxonomic and phylogenetic trees wwwgrass
Bullseye:(7.8.5-1+deb11u1) Buster:(7.6.0-1) Geographic Resources Analysis Support System (GRASS GIS) wwwgrass-core
Bullseye:(7.8.5-1+deb11u1) Buster:(7.6.0-1+b1) GRASS GIS core components wwwgrass-gui
Bullseye:(7.8.5-1+deb11u1) Buster:(7.6.0-1+b1) GRASS GIS graphical user interfaces wwwgravit
Bullseye:(0.5.1+dfsg-5) Buster:(0.5.1+dfsg-3) visually stunning gravity simulator wwwgravit-data
Bullseye:(0.5.1+dfsg-5) Buster:(0.5.1+dfsg-3) data files for Gravit wwwgri
Bullseye:(2.12.27-1.1~deb11u1) Buster:(2.12.26-1+b1) a language for scientific illustration wwwgrinder
Bullseye:(0.5.4-6) Buster:(0.5.4-5) Versatile omics shotgun and amplicon sequencing read simulator wwwgromacs
Bullseye:(2020.6-2) Buster:(2019.1-1) Molecular dynamics simulator, with building and analysis tools wwwgromacs-data
Bullseye:(2020.6-2) Buster:(2019.1-1) GROMACS molecular dynamics sim, data and documentation wwwgromacs-mpich
Bullseye:(2020.6-2) Buster:(2019.1-1) Molecular dynamics sim, binaries for MPICH parallelization wwwgromacs-openmpi
Bullseye:(2020.6-2) Buster:(2019.1-1) Molecular dynamics sim, binaries for OpenMPI parallelization wwwgsort
Bullseye:(0.1.4-3) sort genomic data wwwgubbins
Bullseye:(2.3.5-1) phylogenetic analysis of genome sequences wwwgvb
Bullseye:(1.4-1.1) Buster:(1.4-1) visual simulator of 1 and 2-dimensional vibrations wwwgwama
Bullseye:(2.2.2+dfsg-4) Buster:(2.2.2+dfsg-2) Genome-Wide Association Meta Analysis wwwgwyddion
Bullseye:(2.57-1) Buster:(2.52-1) Scanning Probe Microscopy visualization and analysis tool wwwgwyddion-common
Bullseye:(2.57-1) Buster:(2.52-1) architecture-independent files for Gwyddion SPM analysis tool wwwgyoto
Bullseye:(1.4.4-3) Buster:(1.3.1-1) General relativistic geodesic integration and ray-tracing wwwgyoto-bin
Bullseye:(1.4.4-3+b6) Buster:(1.3.1-1+b1) General relativistic ray-tracing command-line interface www- Back to top
H
h5utils
Bullseye:(1.13.1-4) Buster:(1.13.1-3+b1) HDF5 files visualization tools wwwharminv
Bullseye & Buster:(1.4.1-2) extraction of complex frequencies and amplitudes from time series wwwharvest-tools
Bullseye:(1.3-6) Buster:(1.3-4) archiving and postprocessing for reference-compressed genomic multi-alignments wwwhdf-compass
Bullseye:(0.7~b8-3) Buster:(0.6.0-1) viewer for HDF5 and related formats wwwhdf5-helpers
Bullseye:(1.10.6+repack-4+deb11u1) Buster:(1.10.4+repack-10+deb10u1) HDF5 - Helper tools wwwhdf5-tools
Bullseye:(1.10.6+repack-4+deb11u1) Buster:(1.10.4+repack-10+deb10u1) HDF5 - Runtime tools wwwherisvm
Bullseye:(0.9.0-2) Buster:(0.8.2-1) machine learning tools for classification algorithms wwwhfst
Bullseye:(3.15.1-2+b3) Buster:(3.15.0-1.1~deb10u1) Helsinki Finite-State Transducer Technology wwwhfst-ospell
Bullseye:(0.5.2-1) Buster:(0.5.0-2) Spell checker library and tool based on HFST wwwhhsuite
Bullseye:(3.3.0+ds-4) sensitive protein sequence searching based on HMM-HMM alignment wwwhhsuite-data
Bullseye:(3.3.0+ds-4) Buster:(3.0~beta3+dfsg-3) sensitive protein sequence searching based on HMM-HMM alignment (data) wwwhilive
Bullseye:(2.0a-3+b1) Buster:(1.1-2) realtime alignment of Illumina reads wwwhinge
Bullseye:(0.5.0-6) Buster:(0.5.0-4) long read genome assembler based on hinging wwwhisat2
Bullseye:(2.2.1-2) graph-based alignment of short nucleotide reads to many genomes wwwhmmer
Bullseye & Buster:(3.1b2-1) profile hidden Markov models for protein sequence analysis wwwhmmer2
Bullseye:(2.3.2+dfsg-7) Buster:(2.3.2+dfsg-6) profile hidden Markov models for protein sequence analysis wwwhodie
Bullseye & Buster:(1.5.0-1) prints the date in Latin wwwhorae
Bullseye & Buster:(071~svn537-2.1) interactive graphical processing and analysis of EXAFS data wwwhpcc
Bullseye:(1.5.0-2) Buster:(1.5.0-1+b2) HPC Challenge benchmark wwwhts-nim-tools
Bullseye:(0.2.1-1) tools biological sequences: bam-filter, count-reads, vcf-check wwwhyantesite
Bullseye & Buster:(1.3.0-1.1) geomatic tool to compute neighbourhood population potential wwwhyphy-common
Bullseye:(2.5.28+dfsg-3) Buster:(2.3.14+dfsg-1) Hypothesis testing using Phylogenies (common files) wwwhyphy-mpi
Bullseye:(2.5.28+dfsg-3) Buster:(2.3.14+dfsg-1) Hypothesis testing using Phylogenies (MPI version) wwwhyphy-pt
Bullseye:(2.5.28+dfsg-3) Buster:(2.3.14+dfsg-1) Hypothesis testing using Phylogenies (pthreads version) www- Back to top
I
idba
Bullseye:(1.1.3-7) Buster:(1.1.3-3) iterative De Bruijn Graph short read assemblers wwwidba-extra
Bullseye:(1.1.3-7) iterative De Bruijn Graph short read assemblers (extra tools) wwwidseq-bench
Bullseye:(0.0~git20200902.8241a9a-1) Benchmark generator for the IDseq Portal wwwigdiscover
Bullseye:(0.11-3) analyzes antibody repertoires to find new V genes wwwigor
Bullseye:(1.4.0+dfsg-2) Buster:(1.3.0+dfsg-1) infers V(D)J recombination processes from sequencing data wwwigv
Bullseye:(2.6.3+dfsg-3) Buster:(2.3.90+dfsg-1) Integrative Genomics Viewer wwwiitii
Bullseye:(0.0+git20191030.85209e0-2) Implicit Interval Tree with Interpolation Index wwwimagej
Bullseye:(1.53g-2) Buster:(1.52j-1) Image processing program with a focus on microscopy images wwwimview
Bullseye:(1.1.9h-3) Buster:(1.1.9h-1) Image viewing and analysis application wwwindelible
Bullseye:(1.03-5) Buster:(1.03-4) powerful and flexible simulator of biological evolution wwwindigo-utils
Bullseye:(1.2.3-3.1) Buster:(1.2.3-1) Organic Chemistry Toolkit Utilities wwwinfernal
Bullseye & Buster:(1.0.2-2) inference of RNA secondary structural alignments wwwinhomog
Bullseye:(0.1.9.2-1+b1) Buster:(0.1.9.2-1) kinematical backreaction and average scale factor evolution wwwinkscape-speleo
Bullseye:(1.8-4) Inkscape plugin to help draw surveys wwwinkscape-survex-export
Bullseye:(2.0-1) Inkscape plugin to digitise printed surveys wwwinsilicoseq
Bullseye:(1.5.2-1) sequencing simulator producing realistic Illumina reads wwwipig
Bullseye:(0.0.r5-4) Buster:(0.0.r5-3) integrating PSMs into genome browser visualisations wwwiraf
Bullseye:(2.16.1+2018.11.01-6+b2) Buster:(2.16.1+2018.11.01-2) Image Reduction and Analysis Facility wwwiraf-dev
Bullseye:(2.16.1+2018.11.01-6+b2) Buster:(2.16.1+2018.11.01-2) Image Reduction and Analysis Facility (development files) wwwiraf-fitsutil
Bullseye:(2018.07.06-4+b1) Buster:(2018.07.06-3+b1) FITS utilities for IRAFiraf-mscred
Bullseye:(5.05+2018.07.09-1+b3) Buster:(5.05+2018.07.09-1+b1) CCD mosaic reduction package for IRAFiraf-noao
Bullseye:(2.16.1+2018.11.01-6+b2) Buster:(2.16.1+2018.11.01-2) IRAF NOAO data reduction package wwwiraf-noao-dev
Bullseye:(2.16.1+2018.11.01-6+b2) Buster:(2.16.1+2018.11.01-2) IRAF NOAO data reduction package (development files) wwwiraf-rvsao
Bullseye:(2.8.3-1+b3) Buster:(2.8.3-1+b1) IRAF package to obtain radial velocities from spectra wwwiraf-sptable
Bullseye:(1.0~pre20180612-2+b1) Buster:(1.0~pre20180612-1+b1) IRAF package for Tabular Spectrairaf-wcstools
Bullseye:(3.9.6-1) Buster:(3.9.5-3) Handle the WCS of a FITS image (IRAF package) wwwirstlm
Bullseye & Buster:(6.00.05-2) IRST Language Modeling Toolkit wwwismrmrd-schema
Bullseye:(1.4.2.1-6) Buster:(1.4.0-1) schema for ISMRMRD wwwiso2mesh-demos
Bullseye:(1.9.6+ds-5) sample files and demo scripts for Iso2Mesh toolbox wwwiso2mesh-tools
Bullseye:(1.9.6+ds-5) 3D mesh generation and repairing utilities wwwiva
Bullseye:(1.0.9+ds-11) Buster:(1.0.9+ds-6) iterative virus sequence assembler www- Back to top
J
jaligner
Bullseye:(1.0+dfsg-7) Buster:(1.0+dfsg-6) Smith-Waterman algorithm with Gotoh's improvement wwwjalview
Bullseye:(2.11.1.3+dfsg2-5) Buster:(2.7.dfsg-5) multiple alignment editor wwwjblas
Bullseye:(1.2.4-3) Buster:(1.2.4-2) fast linear algebra library for Java wwwjellyfish
Bullseye:(2.3.0-10) count k-mers in DNA sequences wwwjellyfish-examples
Bullseye:(2.3.0-10) count k-mers in DNA sequences (examples for testing) wwwjellyfish1
Bullseye:(1.1.11-5) Buster:(1.1.11-4) count k-mers in DNA sequences wwwjemboss
Bullseye:(6.6.0+dfsg-9) Buster:(6.6.0+dfsg-7) graphical user interface to EMBOSS wwwjmodeltest
Bullseye:(2.1.10+dfsg-10) Buster:(2.1.10+dfsg-7) HPC selection of models of nucleotide substitution wwwjmol
Bullseye & Buster:(14.6.4+2016.11.05+dfsg1-4) Molecular Viewer wwwjnifti-demos
Bullseye:(0.6-2) sample files and demo scripts for JNIfTI toolbox wwwjsamp
Bullseye:(1.3.7-1) Buster:(1.3.5-1) Java Simple Application Messaging Protocol tool for VO wwwjube
Bullseye:(2.4.1-1) Buster:(2.2.2-1) JUBE Benchmarking Environment wwwjulia
Bullseye:(1.5.3+dfsg-3+rpi1) Buster:(1.0.3+dfsg-4+rpi1) high-performance programming language for technical computing wwwjulia-common
Bullseye:(1.5.3+dfsg-3+rpi1) Buster:(1.0.3+dfsg-4+rpi1) high-performance programming language for technical computing (common files) wwwjulia-factcheck
Bullseye & Buster:(0.1.2-2) Midje-like testing for Julia wwwjupyter-notebook
Bullseye:(6.2.0-1) Buster:(5.7.8-1) Jupyter interactive notebook www- Back to top
K
kalign
Bullseye:(1:3.3-1) Buster:(1:2.03+20110620-5) Global and progressive multiple sequence alignment wwwkallisto
Bullseye:(0.46.2+dfsg-2) near-optimal RNA-Seq quantification wwwkallisto-examples
Bullseye:(0.46.2+dfsg-2) near-optimal RNA-Seq quantification (example data) wwwkalzium
Bullseye:(4:20.12.0-1) Buster:(4:17.08.3-1+b1) periodic table and chemistry tools wwwkalzium-data
Bullseye:(4:20.12.0-1) Buster:(4:17.08.3-1) data files for Kalzium wwwkaptive
Bullseye:(0.7.3-3) obtain information about K and O types for Klebsiella genome assemblies wwwkaptive-data
Bullseye:(0.7.3-3) reference data for kaptive for Klebsiella genome assemblies wwwkaptive-example
Bullseye:(0.7.3-3) example data for kaptive for Klebsiella genome assemblies wwwkhmer-common
Bullseye:(2.1.2+dfsg-8) Buster:(2.1.2+dfsg-6) common files for the khmer project tools wwwkineticstools
Bullseye:(0.6.1+git20200729.e3723e0+dfsg-1) Buster:(0.6.1+git20180425.27a1878-2) detection of DNA modifications wwwkineticstools-data
Bullseye:(0.6.1+git20200729.e3723e0+dfsg-1) Buster:(0.6.1+git20180425.27a1878-2) detection of DNA modifications -- data files wwwking-probe
Bullseye:(2.16.160404+git20200121.9b198c1-3) Buster:(2.16.160404+git20180613.a09b012-1) Evaluate and visualize protein interatomic packing wwwkleborate-examples
Bullseye:(2.0.1-1) tool to screen Klebsiella genome assemblies (example data) wwwklustakwik
Bullseye:(3.0.2+ds-1) Buster:(2.0.1-1) automatic sorting of the samples (spikes) into clusters wwwkma
Bullseye:(1.3.10-1) mapping genomic sequences to raw reads directly against redundant databases wwwkmc
Bullseye:(3.1.1+dfsg-3) Buster:(2.3+dfsg-7) count kmers in genomic sequences wwwkmer
Bullseye:(0~20150903+r2013-8) Buster:(0~20150903+r2013-6) suite of tools for DNA sequence analysis wwwkmer-examples
Bullseye:(0~20150903+r2013-8) Buster:(0~20150903+r2013-6) sample data for kmer suite of tools for DNA sequence analysis wwwkmerresistance
Bullseye:(2.2.0-2) correlates mapped genes with the predicted species of WGS samples wwwkonclude
Bullseye:(0.7.0+1137~dfsg-1) Buster:(0.6.2~dfsg-6) tableau-based description logic reasoner for the semantic web wwwkraken
Bullseye:(1.1.1-2) Buster:(1.1-3) assigning taxonomic labels to short DNA sequences wwwkraken2
Bullseye:(2.1.1-1) taxonomic classification system using exact k-mer matches wwwkst
Bullseye:(2.0.8-4+b1) Buster:(2.0.8-3+b1) scientific data plotting tool wwwkstars
Bullseye:(5:3.4.3-1+b2) Buster:(5:3.0.0-1) desktop planetarium, observation planning and telescope control wwwkstars-data
Bullseye:(5:3.4.3-1) Buster:(5:3.0.0-1) data files for KStars desktop planetarium wwwkstars-data-extra-tycho2
Bullseye & Buster:(1.1r1-9.1) Tycho-2 star catalog for KStarskxterm
Bullseye & Buster:(20061220+dfsg3-4.4) CERNLIB data analysis suite - KUIP terminal emulator www- Back to top
L
lagan
Bullseye:(2.0-6) Buster:(2.0-3) highly parametrizable pairwise global genome sequence aligner wwwlamarc
Bullseye:(2.1.10.1+dfsg-5) Buster:(2.1.10.1+dfsg-3) Likelihood Analysis with Metropolis Algorithm using Random Coalescence wwwlambda-align
Bullseye:(1.0.3-6) Buster:(1.0.3-5) Local Aligner for Massive Biological DatA wwwlambda-align2
Bullseye & Buster:(2.0.0-6) Local Aligner for Massive Biological DatA - v2 wwwlammps
Bullseye:(20210122~gita77bb+ds1-2) Buster:(0~20181211.gitad1b1897d+dfsg1-2) Molecular Dynamics Simulator wwwlast-align
Bullseye:(1179-1) Buster:(963-2) genome-scale comparison of biological sequences wwwlastz
Bullseye:(1.04.03-4) pairwise aligning DNA sequences wwwlastz-examples
Bullseye:(1.04.03-4) pairwise aligning DNA sequences (examples and test scripts) wwwlbt
Bullseye:(1.2.2-7) Buster:(1.2.2-6) converts from LTL formulas to Büchi automata wwwleaff
Bullseye:(0~20150903+r2013-8+b1) Buster:(0~20150903+r2013-6+b3) biological sequence library utilities and applications wwwlefse
Bullseye:(1.0.8-3) Buster:(1.0.8-2) determine features of organisms, clades, taxonomic units, genes wwwlibadios-bin
Bullseye:(1.13.1-28.2) Buster:(1.13.1-16) ADIOS Adaptable IO system for simulations - binaries wwwlibadios-examples
Bullseye:(1.13.1-28.2) Buster:(1.13.1-16) Examples for the ADIOS Adaptable IO system wwwlibatlas-ecmwf-utils
Bullseye:(0.23.0-1) Numerical weather prediction and climate modelling library - utilities wwwlibball1.5-data
Bullseye:(1.5.0+git20180813.37fc53c-6) Buster:(1.5.0+git20180813.37fc53c-3) Biochemical Algorithms Library (data files) wwwlibbio-db-hts-perl
Bullseye:(3.01-3+b2) Perl interface to the HTS library wwwlibbio-tools-phylo-paml-perl
Bullseye:(1.7.3-3) Buster:(1.7.3-2) Bioperl interface to the PAML suite wwwlibbio-tools-run-alignment-clustalw-perl
Bullseye:(1.7.4-2) Buster:(1.7.4-1) Bioperl interface to Clustal W wwwlibbio-tools-run-alignment-tcoffee-perl
Bullseye:(1.7.4-2) Buster:(1.7.4-1) Bioperl interface to T-Coffee wwwlibclhep2.1v5
Bullseye & Buster:(2.1.4.1+dfsg-1) CLHEP: A Class Library for High Energy Physics wwwlibdlpack-dev
Bullseye:(0.0~git20200217.3ec0443-2) Open In Memory Tensor Structure wwwlibeccodes-data
Bullseye:(2.20.0-1) Buster:(2.12.0-1) GRIB and BUFR enecoding/encoding software library - data wwwlibeckit-utils
Bullseye:(1.15.4-1) C++ toolkit for ECMWF tools and applications - development files wwwlibej0
Bullseye:(4.8.8+repack-2) Buster:(4.4.4+dfsg-4) hardware & software framework for developing science experiments wwwlibfckit-utils
Bullseye:(0.9.0-6) Library Fortran toolkit for interoperating Fortran with C/C++ wwwlibgeotiff-epsg
Bullseye & Buster:(1.4.3-1) GeoTIFF library -- EPSG Geodetic Parameter Dataset wwwlibgfsgl0
Bullseye:(20121130+dfsg-7) Buster:(20121130+dfsg-6) graphical viewer for Gerris simulation files. Shared library wwwlibghemical-data
Bullseye:(3.0.0-4.3) Buster:(3.0.0-4.2) Molecular Modelling Library (data files) wwwlibgrib-api-data
Bullseye & Buster:(1.8.0.1-1) grib_api definition files wwwlibhdf5-jni
Bullseye:(1.10.6+repack-4+deb11u1) Buster:(1.10.4+repack-10+deb10u1) native library used by libhdf5-java wwwliblammps-dev
Bullseye:(20210122~gita77bb+ds1-2) Molecular Dynamics Simulator (dev files) wwwliblammps0
Bullseye:(20210122~gita77bb+ds1-2) Molecular Dynamics Simulator (shared library) wwwliblemon-utils
Bullseye:(1.3.1+dfsg-4) Buster:(1.3.1+dfsg-2) Library for Efficient Modeling and Optimization in Networks (utilities) wwwlibliggghts3
Bullseye:(3.8.0+repack1-7) Buster:(3.8.0+repack1-4) Open Source DEM Particle Simulation Software. Shared library wwwliblinear-tools
Bullseye:(2.3.0+dfsg-5) Buster:(2.1.0+dfsg-4) Standalone applications for LIBLINEAR wwwliblorene-debian1
Bullseye:(0.0.0~cvs20161116+dfsg-1+b3) Buster:(0.0.0~cvs20161116+dfsg-1+b2) liblorene shared library wwwliblorene-export-debian0
Bullseye:(0.0.0~cvs20161116+dfsg-1+b3) Buster:(0.0.0~cvs20161116+dfsg-1+b2) liblorene_export shared library wwwliblorenef77-debian1
Bullseye:(0.0.0~cvs20161116+dfsg-1+b3) Buster:(0.0.0~cvs20161116+dfsg-1+b2) liblorenef77 shared library wwwlibmed-tools
Bullseye:(4.1.0+repack-2+b1) Buster:(4.0.0+repack-7) Runtime tools to handle MED files wwwlibmstoolkit-tools
Bullseye:(82-7) Buster:(82-6) libraries for manipulating mass spectrometry data - tools wwwlibncarg-bin
Bullseye:(6.6.2-7) Buster:(6.5.0-2) NCAR command-language library - development tools wwwlibncarg-data
Bullseye:(6.6.2-7) Buster:(6.5.0-2) NCAR command-language library - Data wwwlibocas-tools
Bullseye:(0.97+dfsg-6) Buster:(0.97+dfsg-5) Standalone applications implementing the OCAS solver wwwlibonnx-dev
Bullseye:(1.7.0+dfsg-3) Open Neural Network Exchange (ONNX) (dev) wwwlibonnx-testdata
Bullseye:(1.7.0+dfsg-3) Open Neural Network Exchange (ONNX) (test data) wwwlibonnx1
Bullseye:(1.7.0+dfsg-3) Open Neural Network Exchange (ONNX) (libs) wwwlibonnxifi
Bullseye:(1.7.0+dfsg-3) Open Neural Network Exchange (ONNX) (ONNXIFI) wwwlibopenfoam
Bullseye:(1912.200626-1) Buster:(1812+dfsg1-2) Open source toolbox for Computational Fluid Dynamics (CFD) - libraries wwwlibpluto-jpl-eph-dev
Bullseye & Buster:(0.0~git20180228-1.1) development files to interact with JPL ephemeres data wwwlibpluto-lunar-dev
Bullseye & Buster:(0.0~git20180825.e34c1d1-1) development files for astronomical Lunar library wwwlibpwiz-tools
Bullseye:(3.0.18342-4) Buster:(3.0.18342-2) ProteoWizard command line tools wwwlibqgis-customwidgets
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2+b1) QGIS custom widgets for Qt Designer wwwlibrsl1
Bullseye & Buster:(1.43-1.2) TRMM Radar Software Library wwwlibsilo-bin
Bullseye:(4.10.2.real-9) Buster:(4.10.2.real-5+b1) Utilities to manipulate libsilo files wwwlibssm-bin
Bullseye:(1.4.0-2) Buster:(1.4.0-1) macromolecular superposition library - binaries wwwlibstxxl1v5
Bullseye & Buster:(1.4.1-3) C++ Standard Template Library for extra large datasets wwwlibvcflib-tools
Bullseye:(1.0.2+dfsg-2) C++ library for parsing and manipulating VCF files (tools) wwwlibvdjtools-java
Bullseye:(1.2.1+git20190311-5) Java library of vdjtools wwwlibwannier90-dev
Bullseye:(3.1.0+ds-4) Maximally Localized Wannier Functions - development library wwwlibxy-bin
Bullseye:(1.6-1) Buster:(1.3-1.1) xylib - utilities wwwliggghts
Bullseye:(3.8.0+repack1-7) Buster:(3.8.0+repack1-4) Open Source DEM Particle Simulation Software. wwwlighter
Bullseye:(1.1.2-5) fast and memory-efficient sequencing error corrector wwwlitl-tools
Bullseye:(0.1.9-12) Buster:(0.1.9-4) Lightweight Trace Library - tools wwwlogol
Bullseye:(1.7.9-3) Buster:(1.7.9-1) Pattern matching tool using Logol language wwwlogol-bin
Bullseye:(1.7.9-3) Buster:(1.7.9-1+b1) Pattern matching tool using Logol language wwwloki
Bullseye:(2.4.7.4-10) Buster:(2.4.7.4-8) MCMC linkage analysis on general pedigreeslorene
Bullseye & Buster:(0.0.0~cvs20161116+dfsg-1) framework for numerical relativity wwwlorene-codes-src
Bullseye & Buster:(0.0.0~cvs20161116+dfsg-1) source files of LORENE-based codes wwwltrsift
Bullseye:(1.0.2-9+b1) Buster:(1.0.2-8) postprocessing and classification of LTR retrotransposons wwwlttoolbox
Bullseye:(3.5.3-1) Buster:(3.5.0-3) Apertium lexical processing modules and tools wwwlttoolbox-dev
Bullseye:(3.5.3-1) Buster:(3.5.0-3) Development tools and library for lttoolbox wwwlucy
Bullseye:(1.20-3) Buster:(1.20-1) DNA sequence quality and vector trimming tool wwwlumpy-sv
Bullseye:(0.3.1+dfsg-5) general probabilistic framework for structural variant discovery wwwlumpy-sv-examples
Bullseye:(0.3.1+dfsg-5) general probabilistic framework for structural variant discovery (data) wwwlutefisk
Bullseye:(1.0.7+dfsg-7) Buster:(1.0.7+dfsg-4) de novo interpretation of peptide CID spectra wwwlxi-tools
Bullseye:(1.21-1+b1) Buster:(1.21-1) LAN eXtensions for Instrumentation (LXI) software interface www- Back to top
M
macs
Bullseye:(2.2.7.1-3+b1) Buster:(2.1.2.1-1) Model-based Analysis of ChIP-Seq on short reads sequencers wwwmaffilter
Bullseye:(1.3.1+dfsg-2) Buster:(1.3.1+dfsg-1) process genome alignment in the Multiple Alignment Format wwwmaffilter-examples
Bullseye:(1.3.1+dfsg-2) Buster:(1.3.1+dfsg-1) process genome alignment in the Multiple Alignment Format (example data) wwwmafft
Bullseye:(7.475-1) Buster:(7.407-2) Multiple alignment program for amino acid or nucleotide sequences wwwmagics++
Bullseye:(4.5.3-1) Buster:(3.3.1-1) Executables for the magics++ library wwwmandelbrot-solver
Bullseye:(3.2.1-2) Solver for Mandelbrot polynomials based on MPSolve wwwmapdamage
Bullseye:(2.2.1+dfsg-1) Buster:(2.0.9+dfsg-1) tracking and quantifying damage patterns in ancient DNA sequences wwwmapsembler2
Bullseye:(2.2.4+dfsg-4) Buster:(2.2.4+dfsg-3+b1) bioinformatics targeted assembly software wwwmaq
Bullseye:(0.7.1-9) Buster:(0.7.1-8) maps short fixed-length polymorphic DNA sequence reads to reference sequences wwwmaqview
Bullseye:(0.2.5-10) Buster:(0.2.5-9) graphical read alignment viewer for short gene sequences wwwmash
Bullseye:(2.2.2+dfsg-1+b1) Buster:(2.1+dfsg-2) fast genome and metagenome distance estimation using MinHash wwwmassxpert
Bullseye:(6.0.2-1) polymer chemistry modelling and mass spectrometry data simulation (runtime) wwwmassxpert-data
Bullseye:(6.0.2-1) polymer chemistry modelling and mass spectrometry data simulation (data) wwwmatlab-brain2mesh
Bullseye:(0.7.9-2) automated brain tetrahedral mesh generation toolbox for MATLAB wwwmatlab-gdf
Bullseye:(0.1.3-8) Buster:(0.1.2-2.1) IO library for the GDF -- Matlab interface wwwmatlab-iso2mesh
Bullseye:(1.9.6+ds-5) 3D surface and volumetric mesh generator for MATLAB wwwmatlab-jnifti
Bullseye:(0.6-2) fast NIfTI-1/2 reader and NIfTI-to-JNIfTI converter for MATLAB wwwmatlab-jsonlab
Bullseye:(2.0-1.1) native JSON/UBJSON/MassagePack encoder/decoder for MATLAB wwwmatlab-zmat
Bullseye:(0.9.8+ds-3) in-memory data compression for MATLAB wwwmaude
Bullseye:(3.1-2) Buster:(2.7-2) high-performance logical framework wwwmauve-aligner
Bullseye:(2.4.0+4736-3) Buster:(2.4.0+4736-1+b4) multiple genome alignment wwwmayavi2
Bullseye:(4.7.1-2+b2) Buster:(4.5.0-1+b1) scientific visualization package for 2-D and 3-D data wwwmbpoll
Bullseye:(1.4.11+dfsg-2) command line utility to communicate with ModBus slave (RTU or TCP) wwwmbt
Bullseye:(3.6-3) Buster:(3.4-1) memory-based tagger-generator and tagger wwwmbtserver
Bullseye:(0.14-2) Buster:(0.12-1) Server extensions for the MBT tagger wwwmeep
Bullseye:(1.17.1-1) Buster:(1.7.0-3) software package for FDTD simulation wwwmeep-mpi-default
Bullseye:(1.17.1-2) Buster:(1.7.0-3) software package for FDTD simulation, parallel (OpenMPI) version wwwmeep-openmpi
Bullseye:(1.17.1-2) Buster:(1.7.0-3) software package for FDTD simulation, parallel (OpenMPI) version wwwmelting
Bullseye:(5.2.0-2) Buster:(5.2.0-1) compute the melting temperature of nucleic acid duplex wwwmerkaartor
Bullseye:(0.18.4+ds-5+b2) Buster:(0.18.3+ds-5+b1) map editor for OpenStreetMap.org wwwmeryl
Bullseye:(0~20150903+r2013-8+b1) Buster:(0~20150903+r2013-6+b3) in- and out-of-core kmer counting and utilities wwwmetaphlan2
Bullseye:(2.9.22-1) Buster:(2.7.8-1) Metagenomic Phylogenetic Analysis wwwmetaphlan2-data
Bullseye & Buster:(2.6.0+ds-4) data package for Metagenomic Phylogenetic Analysis wwwmetastudent
Bullseye:(2.0.1-8) Buster:(2.0.1-6) predictor of Gene Ontology terms from protein sequence wwwmetastudent-data
Bullseye:(2.0.1-7) Buster:(2.0.1-4) predictor of Gene Ontology terms from protein sequence - data files wwwmetastudent-data-2
Bullseye:(1.0.0-5) Buster:(1.0.0-4) predictor of Gene Ontology terms from protein sequence - data #2 wwwmetview
Bullseye:(5.10.2-1) Buster:(5.3.0-2) Interactive data visualization and analysis environment, wwwmetview-data
Bullseye:(5.10.2-1) Buster:(5.3.0-2) Data needed for the Metview data analysis environment wwwmhap
Bullseye:(2.1.3+dfsg-3) Buster:(2.1.3+dfsg-2) locality-sensitive hashing to detect long-read overlaps wwwmia-doctools
Bullseye:(2.4.7-7) Buster:(2.4.6-4) Helper scripts for run-time document creation wwwmia-tools
Bullseye:(2.4.7-7) Buster:(2.4.6-4+b1) Command line tools for gray scale image processing wwwmia-viewit
Bullseye:(1.0.5-3) Buster:(1.0.5-2) Viewer program for 3D data sets created by using MIA wwwmialmpick
Bullseye:(0.2.15-1) Buster:(0.2.14-2) Tools for landmark picking in 3D volume data sets wwwmicrobegps
Bullseye:(1.0.0-5) Buster:(1.0.0-3) explorative taxonomic profiling tool for metagenomic data wwwmicrobiomeutil
Bullseye:(20101212+dfsg1-4) Buster:(20101212+dfsg1-2) Microbiome Analysis Utilities wwwmicrobiomeutil-data
Bullseye:(20101212+dfsg1-4) Buster:(20101212+dfsg1-2) Reference 16S sequences and NAST-alignments used by microbiomeutil tools wwwmicrohope
Bullseye:(4.8.8+repack-2) Buster:(4.4.4+dfsg-4) hardware & software framework to learn microcontrollers wwwminc-tools
Bullseye:(2.3.00+dfsg-6) Buster:(2.3.00+dfsg-3+b1) MNI medical image format tools wwwmindthegap-examples
Bullseye:(2.2.2-2) optional scripts and example resources for mindthegap wwwminexpert2
Bullseye:(7.4.1-1) MS^n mass spectrometric data visualization and mining (runtime) wwwminia
Bullseye & Buster:(1.6906-2) short-read biological sequence assembler wwwminiasm
Bullseye:(0.3+dfsg-2) Buster:(0.3+dfsg-1) ultrafast de novo assembler for long noisy DNA sequencing reads wwwminimap
Bullseye:(0.2-5) Buster:(0.2-4) tool for approximate mapping of long biosequences such as DNA reads wwwminimap2
Bullseye:(2.17+dfsg-12+b1) versatile pairwise aligner for genomic and spliced nucleotide sequences wwwminisat
Bullseye & Buster:(1:2.2.1-5) Fast and lightweight SAT solver wwwminisat+
Bullseye & Buster:(1.0-4) solver for pseudo-Boolean constraints wwwmipe
Bullseye:(1.1-9) Buster:(1.1-7) Tools to store PCR-derived data wwwmira-assembler
Bullseye:(4.9.6-5) Buster:(4.9.6-4) Whole Genome Shotgun and EST Sequence Assembler wwwmira-rfam-12s-rrna
Bullseye:(4.9.6-5) Buster:(4.9.6-4) extract of RFAM 12 rRNA database wwwmirtop
Bullseye:(0.4.23-2) annotate miRNAs with a standard mirna/isomir naming wwwmissfits
Bullseye:(2.8.0-4) Buster:(2.8.0-2) Basic maintenance and packaging tasks on FITS files wwwmitools
Bullseye:(2.0.4-3) Buster:(2.0.3-1) view, convert and perform basic maths with medical image datasets wwwmlv-smile
Bullseye:(1.47-8) Buster:(1.47-6) Find statistically significant patterns in sequences wwwmmb-common
Bullseye:(3.2+dfsg-2+deb11u1) model the structure and dynamics of macromolecules (common files) wwwmmseqs2
Bullseye:(12-113e3+ds-3) ultra fast and sensitive protein search and clustering wwwmmseqs2-examples
Bullseye:(12-113e3+ds-3) optional resources for the mmseqs2 package wwwmobyle-programs
Bullseye & Buster:(5.1.2-3) program descriptions for the mobyle portal wwwmobyle-tutorials
Bullseye & Buster:(1.5.0-4) program tutorials for the mobyle portal wwwmocassin
Bullseye:(2.02.73.2-1) Buster:(2.02.73-1) MOnte CArlo SimulationS of Ionised Nebulae wwwmocassin-benchmarks
Bullseye:(2.02.73.2-1) Buster:(2.02.73-1) benchmarks for the photoionisation code MOCASSIN wwwmocassin-data
Bullseye:(2.02.73.2-1) Buster:(2.02.73-1) atomic and optical data for the photoionisation code MOCASSIN wwwmocassin-examples
Bullseye:(2.02.73.2-1) Buster:(2.02.73-1) Examples for the photoionisation code MOCASSIN wwwmolds
Bullseye:(0.3.1-1+b4) Buster:(0.3.1-1+b3) Semi-empirical electronic structure and molecular dynamics wwwmona
Bullseye:(1.4-17-2) Buster:(1.4-17-1) theorem prover based on automata wwwmontage
Bullseye:(6.0+dfsg-7+b2) Buster:(6.0+dfsg-6) Toolkit for assembling FITS images into mosaics wwwmontage-gridtools
Bullseye:(6.0+dfsg-7+b2) Buster:(6.0+dfsg-6) Create files to run montage on the grid wwwmopac7-bin
Bullseye:(1.15-6+b1) Buster:(1.15-6) Semi-empirical Quantum Chemistry Library (binaries) wwwmosdepth
Bullseye:(0.3.1+ds-2) BAM/CRAM depth calculation biological sequencing wwwmosdepth-examples
Bullseye:(0.3.1+ds-2) Test data for mosdepth wwwmothur
Bullseye:(1.44.3-2) Buster:(1.41.21-1) sequence analysis suite for research on microbiota wwwmozilla-biofox
Bullseye & Buster:(1.6-1) extension of bioinformatics tools to Iceape and Iceweasel browsers wwwmpb
Bullseye:(1.11.1-3) Buster:(1.7.0-5) MIT Photonic-Bands wwwmpb-mpi
Bullseye:(1.11.1-3) Buster:(1.7.0-5) MIT Photonic-Bands, parallel (mpich) version wwwmpb-scm
Bullseye:(1.11.1-3) Buster:(1.7.0-5) MIT Photonic-Bands initialisation files wwwmpgrafic
Bullseye:(0.3.19-1) Buster:(0.3.18-1) MPI version of N-body initial conditions grafic package wwwmpi-testsuite
Bullseye & Buster:(3.2+dfsg-1) MPI testsuite results wwwmpqc
Bullseye:(2.3.1-21) Buster:(2.3.1-19) Massively Parallel Quantum Chemistry Program wwwmpqc-support
Bullseye:(2.3.1-21) Buster:(2.3.1-19) Massively Parallel Quantum Chemistry Program (support tools) wwwmpsolve
Bullseye:(3.2.1-2) Multiprecision polynomial solver (command line version) wwwmptp
Bullseye:(0.2.4-3) Buster:(0.2.4-1) single-locus species delimitation wwwmrbayes
Bullseye:(3.2.7a-4) Buster:(3.2.6+dfsg-2+b6) Bayesian Inference of Phylogeny wwwmrbayes-mpi
Bullseye:(3.2.7a-4) Buster:(3.2.6+dfsg-2+b6) Bayesian Inference of Phylogeny - mpi version wwwmriconvert
Bullseye:(1:2.1.0-4) Buster:(1:2.1.0-3) medical image file conversion utility wwwmricron
Bullseye:(1.0.20190902+dfsg-2) Buster:(0.20140804.1~dfsg.1-3) magnetic resonance image conversion, viewing and analysis wwwmricron-data
Bullseye:(1.0.20190902+dfsg-2) Buster:(0.20140804.1~dfsg.1-3) data files for MRIcron wwwmrpt-apps
Bullseye:(1:2.1.7-2) Buster:(1:1.5.6-1+b1) Mobile Robot Programming Toolkit - Console and GUI applications wwwmrpt-common
Bullseye:(1:2.1.7-2) Buster:(1:1.5.6-1) Mobile Robot Programming Toolkit - Example datasets and files wwwmseed2sac
Bullseye:(2.3+ds1-1) Buster:(2.2+ds1-4) Convert MiniSEED time series data to SAC wwwmsxpertsuite
Bullseye:(5.8.9-1) Buster:(5.7.3-1) mass spectrometry software suite - metapackage wwwmsxpertsuite-massxpert
Bullseye:(5.8.9-1) Buster:(5.7.3-1) mass spectrometry software suite - massXpert wwwmsxpertsuite-massxpert-data-doc
Bullseye:(5.8.9-1) Buster:(5.7.3-1) mass spectrometry software suite - massXpert - data and doc wwwmsxpertsuite-minexpert
Bullseye:(5.8.9-1) Buster:(5.7.3-1) mass spectrometry software suite - mineXpert wwwmsxpertsuite-minexpert-data-doc
Bullseye:(5.8.9-1) Buster:(5.7.3-1) mass spectrometry software suite - mineXpert - data and doc wwwmultiqc
Bullseye:(1.9+dfsg-3) output integration for RNA sequencing across tools and samples wwwmummer
Bullseye:(3.23+dfsg-7) Buster:(3.23+dfsg-4) Efficient sequence alignment of full genomes wwwmunipack
Bullseye:(0.5.14-2) Buster:(0.5.11-2) Astronomical photometry software package wwwmunipack-cli
Bullseye:(0.5.14-2) Buster:(0.5.11-2) Command line interface of Munipack wwwmunipack-core
Bullseye:(0.5.14-2) Buster:(0.5.11-2) Core routines of Munipack wwwmunipack-gui
Bullseye:(0.5.14-2) Buster:(0.5.11-2) Graphical user interface of Munipack wwwmurasaki
Bullseye:(1.68.6-12) Buster:(1.68.6-8+b8) homology detection tool across multiple large genomes wwwmurasaki-common
Bullseye:(1.68.6-12) Buster:(1.68.6-8) homology detection tool across multiple large genomes (common files) wwwmurasaki-mpi
Bullseye:(1.68.6-12) Buster:(1.68.6-8+b8) homology detection tool across multiple large genomes (MPI-version) wwwmuscle
Bullseye & Buster:(1:3.8.1551-2) Multiple alignment program of protein sequences wwwmusic-bin
Bullseye:(1.1.16-1.1+b2) Buster:(1.0.7-4+b2) Multi-Simulation Coordinator for MPI -- Utilities wwwmustang
Bullseye:(3.2.3-4) Buster:(3.2.3-3) multiple structural alignment of proteins wwwmustang-testdata
Bullseye:(3.2.3-4) Buster:(3.2.3-3) multiple structural alignment of proteins, test data www- Back to top
N
nanolyse
Bullseye:(1.2.0-1+b7) remove lambda phage reads from a fastq file wwwnanook
Bullseye:(1.33+dfsg-2.1) Buster:(1.33+dfsg-1) pre- and post-alignment analysis of nanopore sequencing data wwwnanook-examples
Bullseye:(1.33+dfsg-2.1) pre- and post-alignment analysis of nanopore sequencing data (examples) wwwnanopolish
Bullseye:(0.13.2-3) consensus caller for nanopore sequencing data wwwnanostat
Bullseye:(1.4.0-3) statistics on long biological sequences wwwnanosv
Bullseye:(1.2.4+git20190409.c1ae30c-3) structural variant caller for nanopore data wwwnast-ier
Bullseye:(20101212+dfsg1-4) Buster:(20101212+dfsg1-2) NAST-based DNA alignment tool wwwnautic
Bullseye & Buster:(1.5-4) computation of observer position in astro-navigation wwwncbi-acc-download
Bullseye:(0.2.7-1) download genome files from NCBI by accession wwwncbi-blast+
Bullseye:(2.11.0+ds-1) Buster:(2.8.1-1+deb10u1) next generation suite of BLAST sequence search tools wwwncbi-blast+-legacy
Bullseye:(2.11.0+ds-1) Buster:(2.8.1-1+deb10u1) NCBI Blast legacy call script wwwncbi-cn3d
Bullseye:(3.0.20170106+dfsg1-9) 3-dimensional viewer for biological molecules wwwncbi-entrez-direct
Bullseye:(14.6.20210224+dfsg-4) Buster:(10.9.20190219+ds-1) NCBI Entrez utilities on the command line wwwncbi-epcr
Bullseye:(2.3.12-1-9) Buster:(2.3.12-1-7) Tool to test a DNA sequence for the presence of sequence tagged sites wwwncbi-rrna-data
Bullseye:(6.1.20170106+dfsg1-9) Buster:(6.1.20170106+dfsg1-0+deb10u2) large rRNA BLAST databases distributed with the NCBI toolkit wwwncbi-seg
Bullseye:(0.0.20000620-6) Buster:(0.0.20000620-5) tool to mask segments of low compositional complexity in amino acid sequences wwwncbi-tools-bin
Bullseye:(6.1.20170106+dfsg1-9) Buster:(6.1.20170106+dfsg1-0+deb10u2) NCBI libraries for biology applications (text-based utilities) wwwncbi-tools-x11
Bullseye:(6.1.20170106+dfsg1-9) Buster:(6.1.20170106+dfsg1-0+deb10u2) NCBI libraries for biology applications (X-based utilities) wwwncl-ncarg
Bullseye:(6.6.2-7) Buster:(6.5.0-2) NCAR Command Language and NCAR graphics wwwncl-tools
Bullseye:(2.1.21+git20190531.feceb81-3) Buster:(2.1.21+git20180827.c71b264-2) tools to deal with NEXUS files wwwnco
Bullseye:(4.9.7-1) Buster:(4.7.9-1) Command-line operators to analyze netCDF files wwwncoils
Bullseye:(2002-8) Buster:(2002-7) coiled coil secondary structure prediction wwwncview
Bullseye:(2.1.8+ds-4) Buster:(2.1.8+ds-3+b1) X11 visual browser for NetCDF format files wwwneat
Bullseye:(2.3.2-2) Buster:(2.2-1) Nebular Empirical Analysis Tool wwwneobio
Bullseye:(0.0.20030929-6) Buster:(0.0.20030929-4) computes alignments of amino acid and nucleotide sequences wwwnetcdf-bin
Bullseye:(1:4.7.4-1) Buster:(1:4.6.2-1+b1) Programs for reading and writing NetCDF files wwwneurodebian
Bullseye:(0.41.0) Buster:(0.38.3) neuroscience-oriented distribution - repository configuration wwwneurodebian-archive-keyring
Bullseye:(0.41.0) Buster:(0.38.3) neuroscience-oriented distribution - GnuPG archive keys wwwneurodebian-desktop
Bullseye:(0.41.0) Buster:(0.38.3) neuroscience-oriented distribution - desktop integration wwwneurodebian-dev
Bullseye:(0.41.0) Buster:(0.38.3) neuroscience-oriented distribution - development tools wwwneurodebian-freeze
Bullseye:(0.41.0) Buster:(0.38.3) nd_freeze tool to freeze APT sources to use snapshots wwwneurodebian-popularity-contest
Bullseye:(0.41.0) Buster:(0.38.3) neuroscience-oriented distribution - popcon integration wwwnexus-tools
Bullseye:(4.4.3-5) NeXus scientific data file format - applications wwwngmlr
Bullseye:(0.2.7+dfsg-4) CoNvex Gap-cost alignMents for Long Reads wwwnifti-bin
Bullseye:(3.0.1-8) Buster:(2.0.0-3) tools shipped with the NIfTI library wwwnifti2dicom-data
Bullseye:(0.4.11-3) Buster:(0.4.11-1) data files for nifti2dicom wwwnim-kexpr-dev
Bullseye:(0.0.2-2) kexpr math expressions for nim wwwnim-lapper-dev
Bullseye:(0.1.7-3) simple, fast interval searches for nim wwwnjplot
Bullseye:(2.4-9) Buster:(2.4-8) phylogenetic tree drawing program wwwnorsnet
Bullseye:(1.0.17-6) Buster:(1.0.17-4) tool to identify unstructured loops in proteins wwwnorsp
Bullseye:(1.0.6-6) Buster:(1.0.6-4) predictor of non-regular secondary structure wwwnumdiff
Bullseye & Buster:(5.9.0-1) Compare similar files with numeric fields wwwnutsqlite
Bullseye:(2.0.6-3) Buster:(2.0.6-1) Dietary nutrition analysis software wwwnwchem
Bullseye:(7.0.2-1) Buster:(6.8.1-5) High-performance computational chemistry software wwwnwchem-data
Bullseye:(7.0.2-1) Buster:(6.8.1-5) High-performance computational chemistry software (data files) www- Back to top
O
oar-web-status
Bullseye:(2.5.9-1) Buster:(2.5.8-1+deb10u1) OAR batch scheduler visualization tool package wwwobjcryst-fox
Bullseye:(1.9.6.0-2.2) Buster:(1.9.6.0-2.1+b1) Free Objects for Xtallography wwwocct-draw
Bullseye:(7.5.1+dfsg1-2+rpi1) Buster:(7.3.0+dfsg1-5+rpi1) Open CASCADE Technology command interpreter and graphical test system wwwoce-draw
Bullseye:(0.18.3-1) Buster:(0.18.2-3) OpenCASCADE Community Edition CAE platform shared library wwwoctave-bart
Bullseye:(0.6.00-3) Buster:(0.4.04-2) Octave bindings for BART wwwoctave-biosig
Bullseye:(2.1.2-4) Buster:(1.9.3-2) Octave bindings for BioSig library wwwoctave-brain2mesh
Bullseye:(0.7.9-2) automated brain tetrahedral mesh generation toolbox for Octave wwwoctave-gdf
Bullseye:(0.1.3-8) Buster:(0.1.2-2.1+b2) IO library for the GDF -- Octave interface wwwoctave-iso2mesh
Bullseye:(1.9.6+ds-5) 3D surface and volumetric mesh generator for Octave wwwoctave-jnifti
Bullseye:(0.6-2) fast NIfTI-1/2 reader and NIfTI-to-JNIfTI converter wwwoctave-jsonlab
Bullseye:(2.0-1.1) native JSON/UBJSON/MassagePack encoder/decoder for Octave wwwoctave-psychtoolbox-3
Bullseye:(3.0.17.9.dfsg1-2) Buster:(3.0.15.20190207.dfsg1-1) toolbox for vision research -- Octave bindings wwwoctave-zmat
Bullseye:(0.9.8+ds-3) in-memory data compression for Octave wwwoctomap-tools
Bullseye:(1.9.5+dfsg-1) Buster:(1.8.1+dfsg-1) Tools for 3D occupancy grid mapping wwwoctovis
Bullseye:(1.9.5+dfsg-1) Visualization tool for OctoMap wwwodil
Bullseye:(0.12.1-1) Buster:(0.10.0-3) C++11 library for the DICOM standard (application) wwwodin
Bullseye:(2.0.4-3) Buster:(2.0.3-1) develop, simulate and run magnetic resonance sequences wwwogdi-bin
Bullseye:(4.1.0+ds-5) Buster:(3.2.1+ds-4) Open Geographic Datastore Interface Library -- utilities wwwompl-plannerarena
Bullseye:(1.5.2+ds1-1) Buster:(1.4.2+ds1-1) Open Motion Planning Library (OMPL) plannerarena wwwopenbabel
Bullseye:(3.1.1+dfsg-6) Buster:(2.4.1+dfsg-3) Chemical toolbox utilities (cli) wwwopenbabel-gui
Bullseye:(3.1.1+dfsg-6) Buster:(2.4.1+dfsg-3) Chemical toolbox utilities (graphical user interface) wwwopendrop
Bullseye:(3.1.7dev0-2) fully-featured pendant drop tensiometry software wwwopenfoam
Bullseye:(1912.200626-1) Buster:(1812+dfsg1-2) Open source toolbox for Computational Fluid Dynamics (CFD) - binaries wwwopenfoam-examples
Bullseye:(1912.200626-1) Buster:(1812+dfsg1-2) Open source toolbox for Computational Fluid Dynamics (CFD) - examples wwwopenmolar
Bullseye & Buster:(1.0.15-gd81f9e5-1) dental practice management software wwwopenmolcas-data
Bullseye:(20.10-2) Quantum chemistry software package (data files) wwwopenmotor
Bullseye:(0.4.0-4) internal ballistics simulator for rocket motor experimenters wwwopenms
Bullseye:(2.6.0+cleaned1-3) Buster:(2.4.0-real-1) package for LC/MS data management and analysis wwwopenms-common
Bullseye:(2.6.0+cleaned1-3) Buster:(2.4.0-real-1) package for LC/MS data management and analysis - shared data wwwopenmx
Bullseye & Buster:(3.8.5+dfsg1-1) package for nano-scale material simulations wwwopenmx-data
Bullseye & Buster:(3.8.5+dfsg1-1) package for nano-scale material simulations (data) wwwopenrocket
Bullseye & Buster:(15.03.5) Model Rocket Simulator wwwopenuniverse
Bullseye:(1.0beta3.1+dfsg-6.1) Buster:(1.0beta3.1+dfsg-6) 3D Universe Simulator wwwopenuniverse-common
Bullseye:(1.0beta3.1+dfsg-6.1) Buster:(1.0beta3.1+dfsg-6) 3D Universe Simulator data files wwwopj2dat
Bullseye & Buster:(20080225-2.2) OriginLab Origin project files to data files converter wwwoptgeo
Bullseye:(2.25-2) Buster:(2.25-1) simulator for geometrical optics wwwopticalraytracer
Bullseye:(9.6-1) Buster:(3.2-1.1) Virtual lens/mirror design workshop wwwoptimir
Bullseye:(1.0-3) Integrating genetic variations in miRNA alignment wwworigami
Bullseye & Buster:(1.2.7+really0.7.4-1.1) command-line management tool for Folding @ Home clients wwworthanc
Bullseye:(1.9.2+really1.9.1+dfsg-1+deb11u1) Buster:(1.5.6+dfsg-1) Lightweight, RESTful DICOM server for medical imaging wwworthanc-dicomweb
Bullseye:(1.5+dfsg-3) Buster:(0.6+dfsg-1) Plugin to extend Orthanc with support of WADO and DICOMweb wwworthanc-gdcm
Bullseye:(1.2-1) DICOM transcoder/decoder for Orthanc using GDCM (notably for JPEG2k) wwworthanc-imagej
Bullseye:(1.2+dfsg-3) Buster:(1.2+dfsg-1) ImageJ plugin to import images from Orthanc wwworthanc-mysql
Bullseye:(3.0-1) Buster:(2.0-2) Plugins to use MySQL or MariaDB as a database back-end to Orthanc wwworthanc-postgresql
Bullseye:(3.3-1) Buster:(3.2-1) Plugins to use PostgreSQL as a database back-end to Orthanc wwworthanc-python
Bullseye:(3.1+ds-1) Develop plugins for Orthanc using the Python programming language wwworthanc-webviewer
Bullseye:(2.7-4) Buster:(2.5-1) Web viewer of medical images for Orthanc wwworthanc-wsi
Bullseye:(1.0-3) Buster:(0.6-2) Whole-slide imaging support for Orthanc (digital pathology) wwwoscar
Bullseye:(1.2.0-1) Open Source CPAP Analysis Reporter (OSCAR) wwwossim-core
Bullseye:(2.9.1-3+b1) Buster:(2.6.2-1) OSSIM core utilities wwwotf-trace
Bullseye:(1.12.5+dfsg-8) Buster:(1.12.5+dfsg-4) Open Trace Format support library - development files www- Back to top
P
packmol
Bullseye:(20.010-1) Initial configurations for Molecular Dynamics Simulations wwwpaje.app
Bullseye:(1.98-1+b9) Buster:(1.98-1+b7) generic visualization tool (Gantt chart and more)pal2nal
Bullseye:(14.1-3) Buster:(14.1-2) converts proteins to genomic DNA alignment wwwpaml
Bullseye:(4.9j+dfsg-3) Buster:(4.9h+dfsg-1) Phylogenetic Analysis by Maximum Likelihood (PAML) wwwparaclu
Bullseye:(9-3) Buster:(9-2) Parametric clustering of genomic and transcriptomic features wwwparafly
Bullseye:(0.1.0-2) parallel command processing using OpenMP wwwparsinsert
Bullseye:(1.04-10) Buster:(1.04-4) Parsimonious Insertion of unclassified sequences into phylogenetic trees wwwparsinsert-testdata
Bullseye:(1.04-10) Buster:(1.04-4) Test data for parsinsert wwwparsnp
Bullseye:(1.5.4+dfsg-1) Buster:(1.2+dfsg-5+b1) rapid core genome multi-alignment wwwpatman
Bullseye:(1.2.2+dfsg-7) Buster:(1.2.2+dfsg-5) rapid alignment of short sequences to large databases wwwpbbamtools
Bullseye:(1.0.6+dfsg-2+rpi1) Buster:(0.19.0+dfsg-4+rpi1) processing Pacific Biosciences binary alignment/map files wwwpbhoney
Bullseye:(15.8.24+dfsg-7) Buster:(15.8.24+dfsg-3) genomic structural variation discovery wwwpbjelly
Bullseye:(15.8.24+dfsg-7) Buster:(15.8.24+dfsg-3) genome assembly upgrading tool wwwpbsim
Bullseye:(1.0.3+git20180330.e014b1d+dfsg-2) Buster:(1.0.3+git20180330.e014b1d+dfsg-1) simulator for PacBio sequencing reads wwwpcl-tools
Bullseye:(1.11.1+dfsg-1) Buster:(1.9.1+dfsg1-10) Point Cloud Library - point cloud processing tools wwwpdb2pqr
Bullseye:(2.1.1+dfsg-7+deb11u1) Buster:(2.1.1+dfsg-5) Preparation of protein structures for electrostatics calculations wwwperlprimer
Bullseye:(1.2.4-2) Buster:(1.2.4-1) Graphical design of primers for PCR wwwperm
Bullseye:(0.4.0-7) Buster:(0.4.0-4) efficient mapping of short reads with periodic spaced seeds wwwphast
Bullseye:(1.5+dfsg-2) Buster:(1.4+dfsg-1) phylogenetic analysis with space/time models wwwphipack
Bullseye:(0.0.20160614-5) Buster:(0.0.20160614-3) PHI test and other tests of recombination wwwphy-spread
Bullseye & Buster:(1.0.3-1) analyze and visualize phylogeographic reconstructions wwwphybin
Bullseye:(0.3-5) Buster:(0.3-3) binning/clustering newick trees by topology wwwphylip
Bullseye:(1:3.697+dfsg-2) Buster:(1:3.697+dfsg-1) package of programs for inferring phylogenies wwwphylonium
Bullseye:(1.3-1) Fast and Accurate Estimation of Evolutionary Distances wwwphyml
Bullseye:(3:3.3.20200621-1) Buster:(3:3.3.20180621-2) Phylogenetic estimation using Maximum Likelihood wwwphysamp
Bullseye:(1.1.0-2) Buster:(1.1.0-1) sample sequence alignment corresponding to phylogeny wwwphyutility
Bullseye:(2.7.3+dfsg-3) Buster:(2.7.3+dfsg-2) simple analyses or modifications on both phylogenetic trees and data matrices wwwphyx
Bullseye:(1.01+ds-2+deb11u1) Buster:(0.999+ds-1) UNIX-style phylogenetic analyses on trees and sequences wwwpicard-tools
Bullseye:(2.24.1+dfsg-1) Command line tools to manipulate SAM and BAM files wwwpicopore
Bullseye:(1.2.0-2) lossless compression of Nanopore files wwwpicosat
Bullseye:(965-2) Buster:(960-1) SAT solver with proof and core support wwwpigx-rnaseq
Bullseye:(0.0.10+ds-2) pipeline for checkpointed and distributed RNA-seq analyses wwwpiler
Bullseye:(0~20140707-3) Buster:(0~20140707-2) genomic repeat analysis wwwpilercr
Bullseye:(1.06+dfsg-4) software for finding CRISPR repeats wwwpilon
Bullseye:(1.23+dfsg-2) Buster:(1.23+dfsg-1) automated genome assembly improvement and variant detection tool wwwpinfish-examples
Bullseye:(0.1.0+ds-2) Examples and test data for pinfish wwwpique
Bullseye:(1.0-2) software pipeline for performing genome wide association studies wwwpirs
Bullseye:(2.0.2+dfsg-9) Buster:(2.0.2+dfsg-8) Profile based Illumina pair-end Reads Simulator wwwpirs-examples
Bullseye:(2.0.2+dfsg-9) Buster:(2.0.2+dfsg-8) profile basd Illumina pair-end Reads Simulator (example data) wwwpirs-profiles
Bullseye:(2.0.2+dfsg-9) Buster:(2.0.2+dfsg-8) profile basd Illumina pair-end Reads Simulator (profile data) wwwpizzly
Bullseye:(0.37.3+ds-5) Identifies gene fusions in RNA sequencing data wwwpkg-r-autopkgtest
Bullseye:(20210303) Buster:(20190121) Script for the automatic testing of R packagespktools
Bullseye:(2.6.7.6+ds-3+b1) Buster:(2.6.7.6+ds-1+b1) GDAL add-on tools to perform useful raster processing wwwplacnet
Bullseye & Buster:(1.03-3) Plasmid Constellation Network project wwwplanets
Bullseye:(0.1.13-20) Buster:(0.1.13-19) Gravitation simulation of planetary bodies wwwplasmidseeker
Bullseye:(1.3+dfsg-1) Buster:(1.0+dfsg-1) identification of known plasmids from whole-genome sequencing reads wwwplast
Bullseye:(2.3.2+dfsg-7) Parallel Local Sequence Alignment Search Tool wwwplast-example
Bullseye:(2.3.2+dfsg-7) Buster:(2.3.2+dfsg-1) Parallel Local Sequence Alignment Search Tool (example data) wwwplink
Bullseye:(1.07+dfsg-3) Buster:(1.07+dfsg-2) whole-genome association analysis toolset wwwplink1.9
Bullseye:(1.90~b6.21-201019-1) Buster:(1.90~b6.6-181012-1) whole-genome association analysis toolset wwwpluto-jpl-eph
Bullseye & Buster:(0.0~git20180228-1.1) command line handling of JPL ephemeres data wwwpluto-lunar
Bullseye & Buster:(0.0~git20180825.e34c1d1-1) routines for predictions of positions in solar system wwwpoa
Bullseye:(2.0+20060928-8) Buster:(2.0+20060928-7) Partial Order Alignment for multiple sequence alignment wwwpopulations
Bullseye:(1.2.33+svn0120106+dfsg-6) Buster:(1.2.33+svn0120106+dfsg-2) population genetic software wwwporechop
Bullseye:(0.2.4+dfsg-2) Buster:(0.2.4+dfsg-1) adapter trimmer for Oxford Nanopore reads wwwporetools
Bullseye:(0.6.0+dfsg-5) Buster:(0.6.0+dfsg-3) toolkit for nanopore nucleotide sequencing data wwwporetools-data
Bullseye:(0.6.0+dfsg-5) Buster:(0.6.0+dfsg-3) toolkit for nanopore nucleotide sequencing data -- sample datasets wwwpp-popularity-contest
Bullseye:(1.0.6-4+b6) Buster:(1.0.6-4) PredictProtein popularity contest wwwpraat
Bullseye:(6.1.38-1) Buster:(6.0.32-1) program for speech analysis and synthesis wwwprank
Bullseye:(0.0.170427+dfsg-3) Buster:(0.0.170427+dfsg-2) Probabilistic Alignment Kit for DNA, codon and amino-acid sequences wwwpredictnls
Bullseye:(1.0.20-6) Buster:(1.0.20-5) prediction and analysis of protein nuclear localization signals wwwprime-phylo
Bullseye:(1.0.11-9) Buster:(1.0.11-7) bayesian estimation of gene trees taking the species tree into account wwwprimer3
Bullseye:(2.4.0-4) Buster:(2.4.0-2) tool to design flanking oligo nucleotides for DNA amplification wwwprimer3-examples
Bullseye:(2.4.0-4) Buster:(2.4.0-2) tool to design flanking oligo nucleotides for DNA amplification (examples) wwwprinseq-lite
Bullseye:(0.20.4-6) PReprocessing and INformation of SEQuence data (lite version) wwwprinseq-lite-examples
Bullseye:(0.20.4-6) PReprocessing and INformation of SEQuence data (example data) wwwproalign
Bullseye:(0.603-5) Buster:(0.603-4) Probabilistic multiple alignment program wwwprobabel
Bullseye:(0.5.0+dfsg-4) Buster:(0.5.0+dfsg-3) Toolset for Genome-Wide Association Analysis wwwprobabel-examples
Bullseye:(0.5.0+dfsg-4) Buster:(0.5.0+dfsg-3) Example files for ProbABEL wwwprobalign
Bullseye:(1.4-9) Buster:(1.4-8) multiple sequence alignment using partition function posterior probabilities wwwprobcons
Bullseye:(1.12-13) Buster:(1.12-12) PROBabilistic CONSistency-based multiple sequence alignment wwwprobcons-extra
Bullseye:(1.12-13) Buster:(1.12-12) Extra programs from the probcons package wwwproda
Bullseye:(1.0-13) Buster:(1.0-12) multiple alignment of protein sequences wwwprodigal
Bullseye & Buster:(1:2.6.3-4) Microbial (bacterial and archaeal) gene finding program wwwprofbval
Bullseye:(1.0.22-7) Buster:(1.0.22-6) predictor of flexible/rigid protein residues from sequence wwwprofisis
Bullseye:(1.0.11-6) Buster:(1.0.11-5) prediction of protein-protein interaction sites from sequence wwwprofnet-bval
Bullseye:(1.0.22-7) Buster:(1.0.22-6) neural network architecture for profbval wwwprofnet-chop
Bullseye:(1.0.22-7) Buster:(1.0.22-6) neural network architecture for profchop wwwprofnet-con
Bullseye:(1.0.22-7) Buster:(1.0.22-6) neural network architecture for profcon wwwprofnet-isis
Bullseye:(1.0.22-7) Buster:(1.0.22-6) neural network architecture for profisis wwwprofnet-md
Bullseye:(1.0.22-7) Buster:(1.0.22-6) neural network architecture for metadisorder wwwprofnet-norsnet
Bullseye:(1.0.22-7) Buster:(1.0.22-6) neural network architecture for norsnet wwwprofnet-prof
Bullseye:(1.0.22-7) Buster:(1.0.22-6) neural network architecture for profacc wwwprofnet-snapfun
Bullseye:(1.0.22-7) Buster:(1.0.22-6) neural network architecture for snapfun wwwprofphd
Bullseye & Buster:(1.0.42-3) secondary structure and solvent accessibility predictor wwwprofphd-net
Bullseye:(1.0.22-7) Buster:(1.0.22-6) neural network architecture for profphd wwwprofphd-utils
Bullseye:(1.0.10-6) Buster:(1.0.10-5) profphd helper utilities convert_seq and filter_hssp wwwproftmb
Bullseye:(1.1.12-9) Buster:(1.1.12-8) per-residue prediction of bacterial transmembrane beta barrels wwwprogressivemauve
Bullseye:(1.2.0+4713+dfsg-5) Buster:(1.2.0+4713+dfsg-4) multiple genome alignment algorithms wwwproj-bin
Bullseye:(7.2.1-1) Buster:(5.2.0-1) Cartographic projection library (tools) wwwproj-rdnap
Bullseye:(2008+2018-5) Buster:(2008-8) RDNAP grid correction files for PROJ wwwprooftree
Bullseye:(0.13-2) Buster:(0.13-1+b28) proof-tree visualization for Proof General wwwproteinortho
Bullseye:(6.0.28+dfsg-1) Buster:(5.16.b+dfsg-1) Detection of (Co-)orthologs in large-scale protein analysis wwwprottest
Bullseye:(3.4.2+dfsg-5) Buster:(3.4.2+dfsg-3) selection of best-fit models of protein evolution wwwpscan-chip
Bullseye:(1.1-3) Buster:(1.1-2) ChIP-based identifcation of TF binding sites wwwpscan-chip-data
Bullseye:(1.1-3) Buster:(1.1-2) auxiliary data for PScan-ChIP wwwpscan-tfbs
Bullseye:(1.2.2-4) Buster:(1.2.2-3) search for transcription factor binding sites wwwpsfex
Bullseye:(3.17.1+dfsg-6) Buster:(3.17.1+dfsg-5) Point Spread Function model extractor wwwpsi3
Bullseye:(3.4.0-6+b1) Buster:(3.4.0-6) Quantum Chemical Program Suite wwwpsi4
Bullseye:(1:1.3.2+dfsg-2) Buster:(1:1.2.1-2) Quantum Chemical Program Suite wwwpsi4-data
Bullseye:(1:1.3.2+dfsg-2) Buster:(1:1.2.1-2) Quantum Chemical Program Suite (data files) wwwpsychopy
Bullseye:(2020.2.10+dfsg-2) environment for creating psychology stimuli in Python wwwpsychtoolbox-3-common
Bullseye:(3.0.17.9.dfsg1-2) Buster:(3.0.15.20190207.dfsg1-1) toolbox for vision research -- arch/interpreter independent part wwwpsychtoolbox-3-lib
Bullseye:(3.0.17.9.dfsg1-2) Buster:(3.0.15.20190207.dfsg1-1) toolbox for vision research -- arch-specific parts wwwpurify
Bullseye:(2.0.0-5+b2) Buster:(2.0.0-4+b2) Collection of routines for radio interferometric imaging wwwpycoqc
Bullseye:(2.5.2+dfsg-1) computes metrics and generates Interactive QC plots wwwpyfai
Bullseye:(0.20.0+dfsg1-3) Buster:(0.17.0+dfsg1-3) Fast Azimuthal Integration scripts wwwpyfr
Bullseye & Buster:(1.5.0-3) flux reconstruction in Python wwwpymca
Bullseye:(5.6.3+dfsg-1) Buster:(5.4.3+dfsg-1) Applications and toolkit for X-ray fluorescence analysis -- scripts wwwpymca-data
Bullseye:(5.6.3+dfsg-1) Buster:(5.4.3+dfsg-1) Architecture independent data files for PyMca wwwpymoctool
Bullseye:(0.5.0-5) Buster:(0.5.0-4) Python Multi-Order Coverage maps tool for Virtual Observatory wwwpymol
Bullseye:(2.4.0+dfsg-2) Buster:(2.2.0+dfsg-4) Molecular Graphics System wwwpymol-data
Bullseye:(2.4.0+dfsg-2) Buster:(2.2.0+dfsg-4) data files for PyMOL wwwpysatellites
Bullseye:(2.6-1) Buster:(2.5-1) simulates the launching of satellitespyscanfcs
Bullseye:(0.3.6+ds-2+b1) Buster:(0.3.2+ds-2) scientific tool for perpendicular line scanning FCS wwwpythia8-data
Bullseye & Buster:(8.1.86-1.2) PYTHIA8 data files wwwpython-drizzle-testdata
Bullseye:(1.13.1-2) Buster:(1.12-2) Dithered image combination for Python (Test data) wwwpython-escript-doc
Bullseye:(5.6-3) Documentation for Escript/Finley wwwpython-pairix-examples
Bullseye:(0.3.7-3) 1D/2D indexing and querying with a pair of genomic coordinates (examples) wwwpython3-airr
Bullseye:(1.3.1-1) Buster:(1.2.1-2) Data Representation Standard library for antibody and TCR sequences wwwpython3-alignlib
Bullseye:(0.1.1+dfsg-1.1+b1) edit and Hamming distances for biological sequences wwwpython3-amp
Bullseye:(0.6.1-1+b2) Buster:(0.6.1-1) Atomistic Machine-learning Package (python 3) wwwpython3-cif2cell
Bullseye:(2.0.0a1+dfsg-3) prepare CIF files for electronic structure calculations wwwpython3-deeptools
Bullseye:(3.5.0-1) platform for exploring biological deep-sequencing data wwwpython3-dnapilib
Bullseye:(1.1-3) adapter prediction for small RNA sequencing - library wwwpython3-geneimpacts
Bullseye:(0.3.7-3) wraps command line tools to assess variants in gene sequences wwwpython3-gffutils
Bullseye:(0.10.1-2) Buster:(0.9-1) Work with GFF and GTF files in a flexible database framework wwwpython3-jupyter-sphinx
Bullseye:(0.2.3-1) Jupyter Sphinx Extension - Python3 wwwpython3-keras
Bullseye:(2.3.1+dfsg-3) Buster:(2.2.4-1) deep learning framework running on Theano or TensorFlow wwwpython3-mmtf
Bullseye:(1.1.2-3) binary encoding of biological structures (Python 3) wwwpython3-nanostat
Bullseye:(1.4.0-3) statistics on long biological sequences wwwpython3-noise
Bullseye:(1.2.3-3+b1) Perlin noise for image generation wwwpython3-onnx
Bullseye:(1.7.0+dfsg-3) Open Neural Network Exchange (ONNX) (Python) wwwpython3-peptidebuilder
Bullseye:(1.1.0-2) generate atomic oligopeptide 3D structure from sequence wwwpython3-pybel
Bullseye:(0.14.10-1) Buster:(0.12.1-1) Biological Expression Language wwwpython3-pybigwig
Bullseye:(0.3.17-1+b2) Buster:(0.3.12-1) Python 3 module for quick access to bigBed and bigWig files wwwpython3-pynlpl
Bullseye:(1.2.9-1) Buster:(1.1.2-1) PyNLPl is a library for Natural Language Processing (Python 3 version) wwwpython3-qiskit-ibmq-provider
Bullseye:(0.4.6-3) Quantum Information Science Kit (Qiskit): IBM Q Provider wwwpython3-qiskit-terra
Bullseye:(0.12.0-2.1+b1) Quantum Information Science Kit (Qiskit) for Python 3 wwwpython3-seqcluster
Bullseye:(1.2.7+ds-1) analysis of small RNA in NGS data wwwpython3-skorch
Bullseye:(0.9.0-3) scikit-learn compatible neural network library that wraps PyTorch wwwpython3-torch-ignite
Bullseye:(0.4.3-1) High-level library to help with training and evaluating in PyTorch wwwpyzo
Bullseye:(4.11.2-1) Buster:(4.4.3-1.2) interactive editor for scientific Python www- Back to top
Q
q2-alignment
Bullseye:(2020.11.1-2) QIIME 2 plugin for generating and manipulating alignments wwwq2-demux
Bullseye:(2020.11.1-1) QIIME 2 plugin for demultiplexing of sequence reads wwwq2-feature-classifier
Bullseye:(2020.11.1-2) QIIME 2 plugin supporting taxonomic classification wwwq2-feature-table
Bullseye:(2020.11.1+dfsg-1) QIIME 2 plugin supporting operations on feature tables wwwq2-quality-control
Bullseye:(2020.11.1-3) QIIME 2 plugin for quality assurance of feature and sequence data wwwq2-quality-filter
Bullseye:(2020.11.1-2) QIIME2 plugin for PHRED-based filtering and trimming wwwq2-sample-classifier
Bullseye:(2020.11.1-3) QIIME 2 plugin for machine learning prediction of sample data wwwq2-taxa
Bullseye:(2020.11.1+dfsg-2) QIIME 2 plugin for working with feature taxonomy annotations wwwq2-types
Bullseye:(2020.11.1-1) QIIME 2 plugin defining types for microbiome analysis wwwq2cli
Bullseye:(2020.11.1-1) Click-based command line interface for QIIME 2 wwwq2templates
Bullseye:(2020.11.1+dfsg-1) Design template package for QIIME 2 Plugins wwwqcat
Bullseye:(1.1.0-2) demultiplexing Oxford Nanopore reads from FASTQ files wwwqcat-examples
Bullseye:(1.1.0-2) demultiplexing Oxford Nanopore reads from FASTQ files (examples) wwwqcumber
Bullseye:(2.3.0-2) Buster:(1.0.14+dfsg-1) quality control of genomic sequences wwwqfits-tools
Bullseye:(6.2.0-8+b1) Buster:(6.2.0-8) FITS manipulation tools wwwqfitsview
Bullseye:(4.0+dfsg-3+b2) Buster:(3.3+p1+dfsg-2+b1) FITS file viewer based on DPUSER wwwqgis
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2+b1) Geographic Information System (GIS) wwwqgis-api-doc
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2) QGIS API documentation wwwqgis-common
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2) QGIS - architecture-independent data wwwqgis-plugin-grass
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2+b1) GRASS plugin for QGIS wwwqgis-plugin-grass-common
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2) GRASS plugin for QGIS - architecture-independent data wwwqgis-provider-grass
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2+b1) GRASS provider for QGIS wwwqgis-providers
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2+b1) collection of data providers to QGIS wwwqgis-providers-common
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2) collection of data providers to QGIS - architecture-independent files wwwqgis-server
Bullseye:(3.10.14+dfsg-1) Buster:(2.18.28+dfsg-2+b1) QGIS server providing various OGC services wwwqgis3-survex-import
Bullseye:(1.2-1) QGIS3 plugin to read survex 3d files, for cave surveying wwwqiime
Bullseye:(2020.11.1-1) Buster:(1.8.0+dfsg-4+b15) Quantitative Insights Into Microbial Ecology wwwqmc
Bullseye & Buster:(0.94-3.1) Quine McClusky Simplification Toolqrisk2
Bullseye:(0.1.20150729-5) Buster:(0.1.20150729-4) cardiovascular disease risk calculator wwwqthid-fcd-controller
Bullseye:(4.1-5) Buster:(4.1-3) Funcube Dongle controller wwwqtltools
Bullseye:(1.3.1+dfsg-2) Buster:(1.1+dfsg-3) Tool set for molecular QTL discovery and analysis wwwquantum-espresso
Bullseye:(6.7-2) Buster:(6.3-4) Electronic-Structure and Ab-Initio Molecular Dynamics Suite wwwquantum-espresso-data
Bullseye:(6.7-2) Buster:(6.3-4) Electronic-Structure and Ab-Initio Molecular Dynamics Suite (Documentation) wwwquicktree
Bullseye:(2.5-5) Neighbor-Joining algorithm for phylogenies wwwquitcount
Bullseye:(3.1.4-3) Buster:(3.1.4-1) Small tool which may help yourself quit smoking wwwqutemol
Bullseye:(0.4.1~cvs20081111-13) Buster:(0.4.1~cvs20081111-12) interactive visualization of macromolecules www- Back to top
R
r-cran-shazam
Bullseye:(1.0.2-1) Buster:(0.1.11-1) Immunoglobulin Somatic Hypermutation Analysis wwwr-cran-tigger
Bullseye:(1.0.0-1) Buster:(0.3.1-1) Infers new Immunoglobulin alleles from Rep-Seq Data wwwraccoon
Bullseye:(1.0b-5) Buster:(1.0b-2) preparation of in silico drug screening projects wwwracon
Bullseye:(1.4.20-1) consensus module for raw de novo DNA assembly of long uncorrected reads wwwradiant
Bullseye:(2.7.1+dfsg-4) Buster:(2.7+dfsg-2) explore hierarchical metagenomic data with zoomable pie charts wwwragout
Bullseye:(2.3-2) Reference-Assisted Genome Ordering UTility wwwragout-examples
Bullseye:(2.3-2) Reference-Assisted Genome Ordering UTility (example data) wwwrambo-k
Bullseye:(1.21+dfsg-3) Buster:(1.21+dfsg-2) Read Assignment Method Based On K-mers wwwrampler
Bullseye:(2.0.0-1) Buster:(1.1.0-1) module for sampling genomic sequences wwwrapmap-dev
Bullseye:(0.15.0+dfsg-1) Buster:(0.12.0+dfsg-3) rapmap - rapid sensitive and accurate DNA read mapping (some headers) wwwrapmap-example-data
Bullseye:(0.15.0+dfsg-1) Buster:(0.12.0+dfsg-3) example data for rapmap - rapid sensitive and accurate DNA read mapping wwwrasmol
Bullseye:(2.7.6.0-2) Buster:(2.7.6.0-1) visualization of biological macromolecules wwwraster3d
Bullseye:(3.0-7-2) Buster:(3.0-3-5+b7) tools for generating images of proteins or other molecules wwwrate4site
Bullseye:(3.0.0-7) Buster:(3.0.0-6) detector of conserved amino-acid sites wwwrawtran
Bullseye:(1.1-1+b2) Buster:(1.1-1) RAW photo to FITS converter wwwraxml
Bullseye:(8.2.12+dfsg-6) Randomized Axelerated Maximum Likelihood of phylogenetic trees wwwray
Bullseye:(2.3.1-7) Buster:(2.3.1-6) de novo genome assemblies of next-gen sequencing data wwwray-extra
Bullseye:(2.3.1-7) Buster:(2.3.1-6) Scripts and XSL sheets for post-processing for ray wwwrdkit-data
Bullseye:(202009.4-1) Buster:(201809.1+dfsg-6) Collection of cheminformatics and machine-learning software (data files) wwwrdp-classifier
Bullseye:(2.10.2-5) Buster:(2.10.2-4) extensible sequence classifier for fungal lsu, bacterial and archaeal 16s wwwreadseq
Bullseye:(1-14) Buster:(1-13) Conversion between sequence formats wwwreaducks
Bullseye:(0.0.3-2) Nanopore read de-multiplexer (read demux -> readux -> readucks, innit) wwwreapr
Bullseye:(1.0.18+dfsg-5) Buster:(1.0.18+dfsg-4) universal tool for genome assembly evaluation wwwrecan
Bullseye:(0.1.2-2) genetic distance plotting for recombination events analysis wwwrefmac-dictionary
Bullseye:(5.41-2) Buster:(5.41-1) dictionary for macromolecular refinement and model building wwwrepeatmasker-recon
Bullseye:(1.08-6) Buster:(1.08-4) finds repeat families from biological sequences wwwreprof
Bullseye:(1.0.1-7) Buster:(1.0.1-6) protein secondary structure and accessibility predictor wwwresfinder
Bullseye:(3.2-3) identify acquired antimicrobial resistance genes wwwresfinder-db
Bullseye:(0.0+git20200408.0322c0d-1) ResFinder database is a curated database of acquired resistance genes wwwresfinder-example
Bullseye:(3.2-3) identify acquired antimicrobial resistance genes (example data) wwwrnahybrid
Bullseye:(2.1.2-6) Buster:(2.1.2-5) Fast and effective prediction of microRNA/target duplexes wwwroary
Bullseye:(3.13.0+dfsg-1) Buster:(3.12.0+dfsg-2) high speed stand alone pan genome pipeline wwwrocketcea
Bullseye:(1.1.18+dfsg-2) NASA Chemical Equilibrium, wrapped in Python wwwroguenarok
Bullseye:(1.0-4) Buster:(1.0-3) versatile and scalable algorithm for rogue taxon identification wwwroutine-update
Bullseye:(0.0.6) routine updater for a Debian source package wwwrtax
Bullseye:(0.984-7) Buster:(0.984-6) Classification of sequence reads of 16S ribosomal RNA gene wwwruby-getspg
Bullseye:(1.16.1-1) C library for crystal symmetry determination - Ruby bindings wwwruby-rgfa
Bullseye:(1.3.1+dfsg-2) Buster:(1.3.1+dfsg-1) parse, edit and write GFA format graphs in Ruby wwwruncircos-gui
Bullseye:(0.0+git20200528.82dda8c-1) Buster:(0.0+git20180828.97703b9-1+b5) GUI tool to run circos www- Back to top
S
sac2mseed
Bullseye & Buster:(1.12+ds1-3) Convert SAC waveform data to MiniSEED wwwsaga
Bullseye:(7.3.0+dfsg-5) Buster:(2.3.1+dfsg-4+b1) System for Automated Geoscientific Analyses wwwsaga-common
Bullseye:(7.3.0+dfsg-5) Buster:(2.3.1+dfsg-4) SAGA GIS architecture independent files wwwsaint
Bullseye:(2.5.0+dfsg-4) Buster:(2.5.0+dfsg-3) Significance Analysis of INTeractome wwwsalmid
Bullseye:(0.1.23-2) Buster:(0.1.23-1) rapid Kmer based Salmonella identifier from sequence data wwwsamblaster
Bullseye:(0.1.26-1) Buster:(0.1.24-2) marks duplicates, extracts discordant/split reads wwwsamclip
Bullseye:(0.4.0-2) filter SAM file for soft and hard clipped alignments wwwsamtools
Bullseye:(1.11-1) Buster:(1.9-4) processing sequence alignments in SAM, BAM and CRAM formats wwwsamtools-test
Bullseye:(1.11-1) Buster:(1.9-4) test files for the samtools package wwwsaods9
Bullseye:(8.2+repack-2) Buster:(8.0.1+repack-2) Image display tool for astronomy wwwsasview
Bullseye:(5.0.3-3) Buster:(4.2.1-1) Small Angle Scattering Analysis suite wwwsat4j
Bullseye & Buster:(2.3.5-0.3) Efficient library of SAT solvers in Java wwwsavi
Bullseye:(1.5.1-4) Buster:(1.5.1-3) satellite constellation visualisation wwwsbmltoolbox
Bullseye:(4.1.0-5) Buster:(4.1.0-4) libsbml toolbox for octave and matlab wwwscamp
Bullseye:(2.0.4+dfsg-1+b4) Buster:(2.0.4+dfsg-1+b1) Compute astrometric and photometric solutions wwwscience-config
Bullseye:(1.14.2) Buster:(1.10) Debian Science Project config package wwwscience-dataacquisition-dev
Bullseye:(1.14.2) Buster:(1.10) Debian Science data acquisition development packages wwwscience-electronics
Bullseye:(1.14.2) Buster:(1.10) Debian Science Electronics transitional package wwwscience-engineering-dev
Bullseye:(1.14.2) Buster:(1.10) Debian Science Engineering-dev packages wwwscience-highenergy-physics
Bullseye:(1.14.2) Buster:(1.10) Debian Science High Energy Physics packages wwwscience-highenergy-physics-dev
Bullseye:(1.14.2) Buster:(1.10) Debian Science High Energy Physics development packages wwwscience-machine-learning
Bullseye:(1.14.2) Buster:(1.10) Debian Science Machine Learning packages wwwscience-mathematics-dev
Bullseye:(1.14.2) Buster:(1.10) Debian Science Mathematics-dev packages wwwscience-meteorology-dev
Bullseye:(1.14.2) Buster:(1.10) Debian Science Meteorology-dev packages wwwscience-nanoscale-physics
Bullseye:(1.14.2) Buster:(1.10) Debian Science Nanoscale Physics packages wwwscience-nanoscale-physics-dev
Bullseye:(1.14.2) Buster:(1.10) Debian Science Nanoscale Physics development packages wwwscience-neuroscience-cognitive
Bullseye:(1.14.2) Buster:(1.10) Debian Science packages for Cognitive Neuroscience wwwscience-neuroscience-modeling
Bullseye:(1.14.2) Buster:(1.10) Debian Science packages for modeling of neural systems wwwscience-physics-dev
Bullseye:(1.14.2) Buster:(1.10) Debian Science Physics-dev packages wwwscience-robotics-dev
Bullseye:(1.14.2) Buster:(1.10) Debian Robotics development packages wwwscience-tasks
Bullseye:(1.14.2) Buster:(1.10) Debian Science tasks for tasksel wwwscience-viewing-dev
Bullseye:(1.14.2) Buster:(1.10) Debian Science development of visualisation applications wwwscoary
Bullseye:(1.6.16-2) Buster:(1.6.16-1) pangenome-wide association studies wwwscram
Bullseye:(0.16.2-3) Buster:(0.16.2-1) Probabilistic Risk Analysis Tool wwwscram-gui
Bullseye:(0.16.2-3) Buster:(0.16.2-1) SCRAM GUI front-end wwwscrappie
Bullseye:(1.4.2-7) basecaller for Nanopore sequencer wwwscrm
Bullseye:(1.7.4-1) Buster:(1.7.3-1) simulator of evolution of genetic sequences wwwsctk
Bullseye:(2.4.10-20151007-1312Z+dfsg2-3.1) Buster:(2.4.10-20151007-1312Z+dfsg2-3.1~deb10u1) speech recognition scoring toolkit wwwscythe
Bullseye:(0.994+git20141017.20d3cff-3) Buster:(0.994+git20141017.20d3cff-1) Bayesian adaptor trimmer for sequencing reads wwwsdaps
Bullseye:(1.9.8-0.1+b1) Buster:(1.2.1-2) scripts for data acquisition with paper-based surveys wwwseaview
Bullseye:(1:5.0.4-1) Buster:(1:4.7-1) Multiplatform interface for sequence alignment and phylogeny wwwsecrecy
Bullseye:(0.0.2+dfsg-2) tool to handle libsecrecy keys and encrypted files wwwseer
Bullseye:(1.1.4-5) Buster:(1.1.4-2+b1) genomic sequence element (kmer) enrichment analysis wwwseesat5
Bullseye & Buster:(0.90.10-1.1) a satellite location programsegemehl
Bullseye:(0.3.4-3) Buster:(0.3.4-1) short read mapping with gaps wwwsegyio-bin
Bullseye:(1.8.3-1+b2) Buster:(1.8.3-1) SEG-Y read/write library for seismic processing (shell utilities) wwwsentencepiece
Bullseye:(0.1.95-1+rpi1) Unsupervised text tokenizer and detokenizer wwwseqan-apps
Bullseye:(2.4.0+dfsg-14) Buster:(2.4.0+dfsg-11) C++ library for the analysis of biological sequences wwwseqcluster
Bullseye:(1.2.7+ds-1) analysis of small RNA in NGS data wwwseqkit
Bullseye:(0.15.0+ds-2) cross-platform and ultrafast toolkit for FASTA/Q file manipulation wwwseqkit-examples
Bullseye:(0.15.0+ds-2) examples for seqkit: toolkit for FASTA/Q file manipulation wwwseqmagick
Bullseye:(0.8.4-1) Buster:(0.7.0-1) imagemagick-like frontend to Biopython SeqIO wwwseqprep
Bullseye:(1.3.2-5) Buster:(1.3.2-3) stripping adaptors and/or merging paired reads of DNA sequences with overlap wwwseqprep-data
Bullseye:(1.3.2-5) Buster:(1.3.2-3) example data set for seqprep - only used for testing wwwseqsero
Bullseye:(1.0.1+dfsg-4) Buster:(1.0.1+dfsg-1) Salmonella serotyping from genome sequencing data wwwseqtk
Bullseye:(1.3-2) Buster:(1.3-1) Fast and lightweight tool for processing sequences in the FASTA or FASTQ format wwwseriation
Bullseye:(0.1+git20201220.04e6202-1) finds a suitable linear order for a set of objects wwwseriation-data
Bullseye:(0.1+git20201220.04e6202-1) test data for seriation wwwsextractor
Bullseye:(2.25.0+ds-3) Buster:(2.19.5+dfsg-6) Dummy transitional package for name change wwwsga
Bullseye:(0.10.15-5) Buster:(0.10.15-4) de novo genome assembler that uses string graphs wwwshapeit4
Bullseye:(4.2.0+dfsg-1) fast and accurate method for estimation of haplotypes (phasing) wwwshovill-examples
Bullseye:(1.1.0-4) Test Data for shovill wwwsibelia
Bullseye:(3.0.7+dfsg-3+b1) comparative genomics tool wwwsibelia-examples
Bullseye:(3.0.7+dfsg-3) comparative genomics tool (example data) wwwsibsim4
Bullseye:(0.20-5) Buster:(0.20-4) align expressed RNA sequences on a DNA template wwwsickle
Bullseye:(1.33+git20150314.f3d6ae3-2) Buster:(1.33+git20150314.f3d6ae3-1) windowed adaptive trimming tool for FASTQ files using quality wwwsiconos
Bullseye:(4.3.1+dfsg-2) modeling and simulation of nonsmooth dynamical systems (simulation runner tool) wwwsiconos-mechanics-tools
Bullseye:(4.3.1+dfsg-2) modeling and simulation of nonsmooth dynamical systems (mechanics tools) wwwsigma-align
Bullseye:(1.1.3-8) Buster:(1.1.3-6) Simple greedy multiple alignment of non-coding DNA sequences wwwsigviewer
Bullseye:(0.6.4-1) Buster:(0.6.2-2) GUI viewer for biosignals such as EEG, EMG, and ECG wwwsilx
Bullseye:(0.14.0+dfsg-1) Buster:(0.9.0+dfsg-3+deb10u1) Toolbox for X-Ray data analysis - Executables wwwsim4
Bullseye:(0.0.20121010-8) Buster:(0.0.20121010-5) tool for aligning cDNA and genomic DNA wwwsim4db
Bullseye:(0~20150903+r2013-8+b1) Buster:(0~20150903+r2013-6+b3) batch spliced alignment of cDNA sequences to a target genome wwwsimkamin
Bullseye:(1.5.3-4) approximate comparative metagenomics method dedicated to NGS datasets wwwsimrisc
Bullseye:(14.02.00-1) simulation model for breast cancer risk wwwsiril
Bullseye:(0.99.8.1-1) Buster:(0.9.10-2) astronomical image processing tool wwwsiril-common
Bullseye:(0.99.8.1-1) architecture-independent files for siril wwwskewer
Bullseye:(0.2.2-2) post-processing of high-throughput DNA sequence reads wwwskycat
Bullseye:(3.1.2+starlink1~b+dfsg-5+b3) Buster:(3.1.2+starlink1~b+dfsg-5+b2) Image visualization and access to catalogs and data for astronomy wwwslang-xfig
Bullseye & Buster:(0.2.0~.117-2) produce plots and drawings through Xfig's fig2dev in S-Lang wwwsleepyhead
Bullseye:(1.0.0-beta-2+dfsg-7) Buster:(1.0.0-beta-2+dfsg-6) Sleep tracking software with a focus on monitoring CPAP treatment wwwsmalt
Bullseye:(0.7.6-9) Buster:(0.7.6-8) Sequence Mapping and Alignment Tool wwwsmalt-examples
Bullseye:(0.7.6-9) Buster:(0.7.6-8) Sequence Mapping and Alignment Tool (examples) wwwsmithwaterman
Bullseye:(0.0+git20160702.2610e25-11) Buster:(0.0+git20160702.2610e25-7) determine similar regions between two strings or genomic sequences wwwsmrtanalysis
Bullseye:(0~20210111) Buster:(0~20161126) software suite for single molecule, real-time sequencing wwwsnakemake
Bullseye:(5.24.1-2) Buster:(5.4.0-1) pythonic workflow management system wwwsnap
Bullseye:(2013-11-29-11) Buster:(2013-11-29-9) location of genes from DNA sequence with hidden markov model wwwsniffles
Bullseye:(1.0.12b+ds-1) Buster:(1.0.11+ds-1) structural variation caller using third-generation sequencing wwwsnp-sites
Bullseye:(2.5.1-1) Buster:(2.4.1-1) Binary code for the package snp-sites wwwsnpomatic
Bullseye:(1.0-5) Buster:(1.0-4) fast, stringent short-read mapping software wwwsoapsnp
Bullseye:(1.03-4) Buster:(1.03-3) resequencing utility that can assemble consensus sequence of genomes wwwsolvate-doc
Bullseye:(1.0-3) Buster:(1.0-2) Documentation for solvate wwwsource-extractor
Bullseye:(2.25.0+ds-3) Source extractor for astronomical images wwwspaced
Bullseye:(1.2.0-201605+dfsg-2) Buster:(1.2.0-201605+dfsg-1) alignment-free sequence comparison using spaced words wwwspaln
Bullseye:(2.4.1+dfsg-3) splicing-aware transcript-alignment to genomic DNA wwwspaln-data
Bullseye:(2.4.1+dfsg-3) splicing-aware transcript-alignment to genomic DNA (data) wwwspass
Bullseye:(3.9-1.1) Buster:(3.7-4) automated theorem prover for first-order logic with equality wwwspatialite-bin
Bullseye:(5.0.1-1) Buster:(4.3.0-2+b3) Geospatial extension for SQLite - tools wwwsplash
Bullseye:(2.10.1-1) Buster:(2.8.0-1) Visualisation tool for Smoothed Particle Hydrodynamics simulation wwwspoa
Bullseye:(4.0.7+ds-1) SIMD partial order alignment tool wwwsprai
Bullseye:(0.9.9.23+dfsg1-2) Buster:(0.9.9.23+dfsg-2) single-pass sequencing read accuracy improver wwwspread-phy
Bullseye:(1.0.7+dfsg-3) Buster:(1.0.7+dfsg-2) analyze and visualize phylogeographic reconstructions wwwspview
Bullseye:(2.0.0~beta2-2) Spectrum Viewer wwwsquizz
Bullseye:(0.99d+dfsg-3) Buster:(0.99d+dfsg-2) Converter for genetic sequences and alignments wwwssake
Bullseye:(4.0-3) Buster:(4.0-2) genomics application for assembling millions of very short DNA sequences wwwssake-examples
Bullseye:(4.0-3) Buster:(4.0-2) example data for SSAKE, a genomic assembler of short reads wwwsspace
Bullseye:(2.1.1+dfsg-5) Buster:(2.1.1+dfsg-4) scaffolding pre-assembled contigs after extension wwwssw-align
Bullseye:(1.1-13) Smith-Waterman aligner based on libssw wwwstacks
Bullseye:(2.55+dfsg-1) Buster:(2.2+dfsg-1+b1) pipeline for building loci from short-read DNA sequences wwwstaden
Bullseye:(2.0.0+b11-4+b1) Buster:(2.0.0+b11-4) DNA sequence assembly (Gap4/Gap5), editing and analysis tools wwwstaden-common
Bullseye & Buster:(2.0.0+b11-4) Architecture independent files for Staden wwwstaden-io-lib-examples
Bullseye:(1.14.13-4) Buster:(1.14.11-6) programs for manipulating DNA sequencing files (usage examples) wwwstaden-io-lib-utils
Bullseye:(1.14.13-4) Buster:(1.14.11-6) programs for manipulating DNA sequencing files wwwstardata-common
Bullseye & Buster:(0.8) Common framework to manage astronomy packages wwwstarplot
Bullseye:(0.95.5-8.3+b1) Buster:(0.95.5-8.3) 3-dimensional perspective star map viewer wwwstarpu-examples
Bullseye:(1.3.7+dfsg-3) Buster:(1.2.6+dfsg-7) Task scheduler for heterogeneous multicore machines - exs wwwstellarium
Bullseye:(0.20.4-3) Buster:(0.18.3-1) real-time photo-realistic sky generator wwwstellarium-data
Bullseye:(0.20.4-3) Buster:(0.18.3-1) Stellarium data files wwwstep
Bullseye:(4:20.12.1-1) Buster:(4:18.08.1-1+b1) interactive physical simulator for KDE wwwstiff
Bullseye:(2.4.0-5) Buster:(2.4.0-3) convert scientific FITS images to the TIFF format wwwstilts
Bullseye:(3.4-2) Buster:(3.1.5-1) Starlink Tables Infrastructure Library Tool Set wwwstimfit
Bullseye:(0.16.0-1+b1) Buster:(0.15.8-1+b1) Program for viewing and analyzing electrophysiological data wwwstringtie
Bullseye:(2.1.4+ds-4) assemble short RNAseq reads to transcripts wwwsubread
Bullseye:(2.0.1+dfsg-1) Buster:(1.6.3+dfsg-1) toolkit for processing next-gen sequencing data wwwsubread-data
Bullseye:(2.0.1+dfsg-1) Buster:(1.6.3+dfsg-1) data files for subread package wwwsuitename
Bullseye:(0.3.070919+git20180613.ebb1325-2) Buster:(0.3.070628-2) categorize each suite in an RNA backbone wwwsumaclust
Bullseye:(1.0.36+ds-1) Buster:(1.0.31-2) fast and exact clustering of genomic sequences wwwsumatra
Bullseye:(1.0.36+ds-1) Buster:(1.0.31-2) fast and exact comparison and clustering of sequences wwwsumo
Bullseye:(1.8.0+dfsg2-5) Buster:(1.1.0+dfsg1-1) Simulation of Urban MObility (SUMO) wwwsurankco
Bullseye:(0.0.r5+dfsg-3) Buster:(0.0.r5+dfsg-2) Supervised Ranking of Contigs in de novo Assemblies wwwsurvex
Bullseye:(1.2.45-1) Buster:(1.2.38-1) cave surveying and mapping software wwwsurvex-aven
Bullseye:(1.2.45-1) Buster:(1.2.38-1) sophisticated cave survey viewer for Survex wwwsurvivor
Bullseye:(1.0.7-2) tool set for simulating/evaluating SVs wwwsvim
Bullseye:(1.4.2+ds-1) Structural variant caller for long sequencing reads wwwswarp
Bullseye:(2.41.4-2) Buster:(2.38.0+dfsg-4) Resample and co-add together FITS images wwwswe-basic-data
Bullseye:(1.80.00.0002-1.1) Buster:(1.80.00.0002-1) basic data files for the libswe package wwwswe-standard-data
Bullseye:(00004-1.1) Buster:(00004-1) standard data for the Swiss Ephemeris wwwsweed
Bullseye:(3.2.1+dfsg-5) Buster:(3.2.1+dfsg-1) assessment of SNPs for their evolutionary advantage wwwsyrthes
Bullseye:(4.3.5+20200129-dfsg1-1+b1) Buster:(4.3.0-dfsg1-3) Transient thermal simulations in complex solid geometries wwwsyrthes-gui
Bullseye:(4.3.5+20200129-dfsg1-1) Buster:(4.3.0-dfsg1-3) Transient thermal simulations in complex solid geometries - GUI wwwsyrthes-tests
Bullseye:(4.3.5+20200129-dfsg1-1) Buster:(4.3.0-dfsg1-3) Test cases for SYRTHES wwwsyrthes-tools
Bullseye:(4.3.5+20200129-dfsg1-1+b1) Buster:(4.3.0-dfsg1-3) Transient thermal simulations in complex solid geometries - tools www- Back to top
T
t-coffee
Bullseye:(13.41.0.28bdc39+dfsg-4) Buster:(12.00.7fb08c2-4) Multiple Sequence Alignment wwwt-coffee-examples
Bullseye:(13.41.0.28bdc39+dfsg-4) Buster:(12.00.7fb08c2-4) annotated examples for the use of T-Coffee wwwtabix
Bullseye:(1.11-4) Buster:(1.9-12~deb10u1) generic indexer for TAB-delimited genome position files wwwtandem-mass
Bullseye & Buster:(1:201702011-1) mass spectrometry software for protein identification wwwtantan
Bullseye:(23-1) Buster:(22-1) low complexity and tandem repeat masker for biosequences wwwtcd-utils
Bullseye & Buster:(20061127-2) convert Tide Constituent Database (TCD) filestclfitsy
Bullseye:(8.2+repack-2) Tcl FITS Extension wwwtcliis
Bullseye:(8.2+repack-2) Buster:(8.0.1+repack-2) Tcl IIS protocol package wwwteem-apps
Bullseye:(1.12.0~20160122-4) Buster:(1.12.0~20160122-2) Tools to process and visualize scientific data and images - command line tools wwwterraintool
Bullseye:(1.16-3) Buster:(1.13-2) Generates survex/therion terrain models from SRTM/NASADEM data. wwwtheli
Bullseye:(3.0.5-2) Astronomical image data reduction pipeline wwwtherion
Bullseye:(5.5.7ds1-2) Buster:(5.4.3ds1-6) Cave surveying - 2D and 3D drawing software wwwtherion-viewer
Bullseye:(5.5.7ds1-2) Buster:(5.4.3ds1-6) Cave surveying - 3D viewer for therion models wwwtheseus
Bullseye:(3.3.0-9) Buster:(3.3.0-8) superimpose macromolecules using maximum likelihood wwwtheseus-examples
Bullseye:(3.3.0-9) Buster:(3.3.0-8) superimpose macromolecules using maximum likelihood (examples) wwwthesias
Bullseye:(3.1.1-1) Testing Haplotype Effects In Association Studies wwwtiddit
Bullseye:(2.12.0+dfsg-3+b1) structural variant calling wwwtigr-glimmer
Bullseye:(3.02b-5) Buster:(3.02b-2) Gene detection in archea and bacteria wwwtimbl
Bullseye:(6.5-3) Buster:(6.4.13-1) Tilburg Memory Based Learner wwwtimblserver
Bullseye:(1.14-3) Buster:(1.12-1) Server extensions for Timbl wwwtksao
Bullseye:(8.2+repack-2) Buster:(8.0.1+repack-2) Tk widgets for astronomical imaging and data visualization wwwtm-align
Bullseye:(20190822+dfsg-2) Buster:(20170708+dfsg-2) structural alignment of proteins wwwtnseq-transit
Bullseye:(3.2.1-1) Buster:(2.3.4-1) statistical calculations of essentiality of genes or genomic regions wwwtombo
Bullseye:(1.5.1-2+b1) identification of modified nucleotides from raw nanopore sequencing data wwwtopcat
Bullseye:(4.8-2) Buster:(4.6.2-1) Tool for OPerations on Catalogues And Tables wwwtophat-recondition
Bullseye:(1.4-3) post-processor for TopHat unmapped reads wwwtoppic
Bullseye:(1.3.0+dfsg1-4) Top-down proteoform identification and characterization (programs) wwwtoppic-common
Bullseye:(1.3.0+dfsg1-4) Top-down proteoform identification and characterization (common data) wwwtoppred
Bullseye:(1.10-8) Buster:(1.10-7) transmembrane topology prediction wwwtortoize
Bullseye:(2.0.1-2) Application to calculate ramachandran z-scores wwwtoulbar2
Bullseye:(1.1.1+dfsg-1) Buster:(1.0.0+dfsg3-2) Exact combinatorial optimization for Graphical Models wwwtoulbar2-doc
Bullseye:(1.1.1+dfsg-1) Buster:(1.0.0+dfsg3-2) Exact combinatorial optimization for Graphical Models - documentation wwwtrace2dbest
Bullseye:(3.0.1-2) Buster:(3.0.1-1) bulk submission of chromatogram data to dbEST wwwtrace2dbest-doc
Bullseye:(3.0.1-2) Buster:(3.0.1-1) Documentation and sample files for trace2dbest wwwtracetuner
Bullseye:(3.0.6~beta+dfsg-3) Buster:(3.0.6~beta+dfsg-1) interpretation of DNA Sanger sequencing data wwwtranscalc
Bullseye:(0.14-7) Buster:(0.14-6) microwave and RF transmission line calculator wwwtransdecoder
Bullseye:(5.0.1-3) Buster:(5.0.1-2) find coding regions within RNA transcript sequences wwwtransfuse
Bullseye:(0.5.7-1) Runs formatted documents through transformations/translation wwwtransrate-tools
Bullseye:(1.0.0-3) Buster:(1.0.0-2) helper for transrate wwwtranstermhp
Bullseye:(2.09-5) Buster:(2.09-4) find rho-independent transcription terminators in bacterial genomes wwwtravis
Bullseye:(200504+hf2-1) Buster:(190101-1) trajectory analyzer and visualizer wwwtree-ppuzzle
Bullseye:(5.3~rc16+dfsg-8) Buster:(5.2-11) Parallelized reconstruction of phylogenetic trees by maximum likelihood wwwtree-puzzle
Bullseye:(5.3~rc16+dfsg-8) Buster:(5.2-11) Reconstruction of phylogenetic trees by maximum likelihood wwwtreeview
Bullseye:(1.2.0+dfsg-1) Buster:(1.1.6.4+dfsg1-4) Java re-implementation of Michael Eisen's TreeView wwwtreeviewx
Bullseye:(0.5.1+git20100823.7e4d0e9-3) Buster:(0.5.1+git20100823.7e4d0e9-1) Displays and prints phylogenetic trees wwwtrf
Bullseye:(4.09.1-4) locate and display tandem repeats in DNA sequences wwwtrf-examples
Bullseye:(4.09.1-4) locate and display tandem repeats in DNA sequences (examples) wwwtrim-galore
Bullseye:(0.6.6-1) automate quality and adapter trimming for DNA sequencing wwwtrimmomatic
Bullseye:(0.39+dfsg-2) Buster:(0.38+dfsg-1) flexible read trimming tool for Illumina NGS data wwwtrinculo
Bullseye:(0.96+dfsg-3) toolkit to carry out genetic association for multi-category phenotypes wwwtrinityrnaseq-examples
Bullseye:(2.11.0+dfsg-6) Buster:(2.6.6+dfsg-6) RNA-Seq De novo Assembly common example and testing files wwwtrnascan-se-common
Bullseye:(2.0.7+ds-1) Buster:(2.0.0-3) detection of transfer RNA genes in genomic sequence (common files) wwwtunnelx
Bullseye:(20190701-1) Buster:(20170928-2) Cave Survey drawing software wwwtvc
Bullseye:(5.0.3+git20151221.80e144e+dfsg-3+b3) Buster:(5.0.3+git20151221.80e144e+dfsg-2) genetic variant caller for Ion Torrent sequencing platforms wwwtwms
Bullseye:(0.07z+git20201202+bb7c3f8-1) Buster:(0.07z-1) tiny web map service www- Back to top
U
ubertooth
Bullseye:(2018.12.R1-5) Buster:(2018.12.R1-2) 2.4 GHz wireless development platform for Bluetooth experimentation wwwubertooth-firmware
Bullseye:(2018.12.R1-5) Buster:(2018.12.R1-2) Firmware for Ubertooth wwwubertooth-firmware-source
Bullseye:(2018.12.R1-5) Buster:(2018.12.R1-2) Source code for the Ubertooth firmware wwwuc-echo
Bullseye:(1.12-15) Buster:(1.12-11) error correction algorithm designed for short-reads from NGS wwwucto
Bullseye:(0.21.1-2+b1) Buster:(0.14-2) Unicode Tokenizer wwwuctodata
Bullseye & Buster:(0.8-2) Data files for Ucto wwwugene-data
Bullseye:(34.0+dfsg-2) Buster:(1.31.1+dfsg-1) required data for UGENE - integrated bioinformatics toolkit wwwuhd-host
Bullseye:(3.15.0.0-4) Buster:(3.13.1.0-3) universal hardware driver for Ettus Research products - host apps wwwumap-learn
Bullseye:(0.4.5+dfsg-2) Uniform Manifold Approximation and Projection wwwumis
Bullseye:(1.0.7-1+b1) tools for processing UMI RNA-tag data wwwumis-examples
Bullseye:(1.0.7-1) tools for processing UMI RNA-tag data (examples) wwwuncalled
Bullseye:(2.2+ds-1) Utility for Nanopore Current Alignment to Large Expanses of DNA wwwunicycler-data
Bullseye:(0.4.8+dfsg-2) Buster:(0.4.7+dfsg-2) hybrid assembly pipeline for bacterial genomes (data package) wwwunits-filter
Bullseye:(4.0-1) Buster:(3.9-1) Parser for expressions concerning physical valuesurg-utils
Bullseye & Buster:(0.8.18-2) utilities for Hokuyo URG/UTM laser range scanners- Back to top
V
v-sim
Bullseye:(3.7.2-8+b2) Buster:(3.7.2-6) Visualize atomic structures wwwv-sim-common
Bullseye:(3.7.2-8) Buster:(3.7.2-6) Visualize atomic structures (support files) wwwv-sim-plugins
Bullseye:(3.7.2-8+b2) Buster:(3.7.2-6) Plugins for V_Sim (a 3D visualization package) wwwvarna
Bullseye:(3-93+ds-3) Buster:(3-93+ds-2) Visualization Applet for RNA wwwvcfanno
Bullseye:(0.3.2+ds-2) annotate a VCF with other VCFs/BEDs/tabixed files wwwvcfanno-examples
Bullseye:(0.3.2+ds-2) examples for vcfanno: annotate a VCF with other VCFs/BEDs/tabixed files wwwvcftools
Bullseye:(0.1.16-2) Buster:(0.1.16-1) Collection of tools to work with VCF files wwwvdjtools
Bullseye:(1.2.1+git20190311-5) framework for post-analysis of B/T cell repertoires wwwvelvet
Bullseye:(1.2.10+dfsg1-7) Buster:(1.2.10+dfsg1-5) Nucleic acid sequence assembler for very short reads wwwvelvet-example
Bullseye:(1.2.10+dfsg1-7) Buster:(1.2.10+dfsg1-5) Example data for the Velvet sequence assembler wwwvelvet-long
Bullseye:(1.2.10+dfsg1-7) Buster:(1.2.10+dfsg1-5) Nucleic acid sequence assembler for very short reads, long version wwwvelvet-tests
Bullseye:(1.2.10+dfsg1-7) Buster:(1.2.10+dfsg1-5) Test data for the Velvet sequence assembler wwwvelvetoptimiser
Bullseye:(2.2.6-3) Buster:(2.2.6-2) automatically optimise Velvet do novo assembly parameters wwwveusz
Bullseye:(3.3.1-1) 2D and 3D scientific plotting application with graphical interface wwwvg-docs
Bullseye:(1.30.0+ds-1) tools for working with genome variation graphs -- docs wwwvirulencefinder
Bullseye:(2.0.3+git20190809.dde157a-3) identify virulence genes in total or partial sequenced isolates of bacteria wwwvirulencefinder-examples
Bullseye:(2.0.3+git20190809.dde157a-3) example data for virulencefinder wwwvisp-images-data
Bullseye:(3.3.0-1) Buster:(3.2.0-1) visual servoing library - dataset reference files wwwvistrails
Bullseye:(3.0~git+9dc22bd-2) Buster:(2.2.4-1) Science visualisation workflow toolkit wwwvitables
Bullseye:(3.0.0-1.1) Buster:(2.1-1) graphical tool to browse and edit PyTables and HDF5 files wwwvmatch
Bullseye:(2.3.1+dfsg-6) large scale sequence analysis software wwwvoro++
Bullseye:(0.5+revert-to-0.4.6+dfsg1-1) Buster:(0.4.6+dfsg1-3) library for the computation of the Voronoi diagram wwwvoro++-examples
Bullseye:(0.5+revert-to-0.4.6+dfsg1-1) Buster:(0.4.6+dfsg1-3) library for the computation of the Voronoi diagram (examples) wwwvoronota
Bullseye:(1.22.3149-1) Buster:(1.19.2352-1) Voronoi diagram-based tool to find atom contacts wwwvotca-csg
Bullseye:(1.6.4-1) Buster:(1.5-3) VOTCA's coarse-graining engine wwwvotca-csg-scripts
Bullseye:(1.6.4-1) Buster:(1.5-3) VOTCA's coarse-graining scripts wwwvotca-csg-tutorials
Bullseye:(1.6.4-1) Buster:(1.5-3) VOTCA's coarse-graining tutorials wwwvotca-tools
Bullseye:(1.6.4-1) VOTCA's tools library, helper binaries wwwvotca-xtp
Bullseye:(1.6.4-1) VOTCA's exciton transport engine wwwvotca-xtp-tutorials
Bullseye:(1.6.4-1) VOTCA's coarse-graining tutorials wwwvt
Bullseye:(0.57721+ds-3) toolset for short variant discovery in genetic sequence data wwwvt-examples
Bullseye:(0.57721+ds-3) toolset for short variant discovery in genetic sequence data (examples) www- Back to top
W
wannier90
Bullseye:(3.1.0+ds-4) Maximally Localized Wannier Functions - executables wwwwannier90-data
Bullseye:(3.1.0+ds-4) Maximally Localized Wannier Functions - documentation and examples wwwwcslib-tools
Bullseye:(7.4+ds-2) Buster:(6.2-2) Command line tools utilizing wcslib wwwwcstools
Bullseye:(3.9.6-1) Buster:(3.9.5-3) Handle the WCS of a FITS image wwwweightwatcher
Bullseye:(1.12+dfsg-2) Buster:(1.12+dfsg-1) Combine maps and polygon data for astronomical image processing wwwweka
Bullseye:(3.6.14-2) Buster:(3.6.14-1) Machine learning algorithms for data mining tasks wwwwham-align
Bullseye:(0.1.5-8) Wisconsin's High-Throughput Alignment Method wwwwigeon
Bullseye:(20101212+dfsg1-4) Buster:(20101212+dfsg1-2) reimplementation of the Pintail 16S DNA anomaly detection utility wwwwise
Bullseye:(2.4.1-23) Buster:(2.4.1-21) comparison of biopolymers, like DNA and protein sequences wwwworldwind
Bullseye & Buster:(0.5.0-10) 3D Virtual Globe wwwwsclean
Bullseye:(2.10.1-1+b1) Buster:(2.6-1+b3) Fast generic widefield interferometric imager wwwwtdbg2
Bullseye:(2.5-7) de novo sequence assembler for long noisy reads wwwwtdbg2-examples
Bullseye:(2.5-7) Examples for wtdbg - de novo sequence assembler wwwwxastrocapture
Bullseye:(1.8.1+git20140821.796e1a1+dfsg-1) Buster:(1.8.1+git20140821+dfsg-2) Windows linuX Astronomy Capture www- Back to top
X
xbs
Bullseye & Buster:(0-10) 3-d models and movies of moleculesxcas
Bullseye:(1.6.0.41+dfsg1-1) Buster:(1.4.9.69+dfsg1-2) Computer Algebra System - console and graphical calculator wwwxcrysden
Bullseye:(1.6.2-4) Crystalline and Molecular Structure Visualizer wwwxcrysden-data
Bullseye:(1.6.2-4) Crystalline and Molecular Structure Visualizer (Data Files) wwwxdrawchem
Bullseye:(1:1.11.0-2) Buster:(1:1.10.2.1-2) Chemical structures and reactions editorxeus-python-dev
Bullseye:(0.9.5-1) Native jupyter kernel for python (headers) wwwxfoil
Bullseye & Buster:(6.99.dfsg+1-1) program for the design and analysis of subsonic airfoils wwwxgboost
Bullseye:(1.2.1-1) Scalable and Flexible Gradient Boosting (Executable) wwwxgterm
Bullseye:(2.0+2020.06.15+dfsg-1) Terminal emulator to work with IRAF wwwximtool
Bullseye:(2.0+2020.06.15+dfsg-1) Interactive image display program for the X Window System wwwxmakemol
Bullseye:(5.16-10) Buster:(5.16-9) program for visualizing atomic and molecular systems wwwxmakemol-gl
Bullseye:(5.16-10) Buster:(5.16-9) program for visualizing atomic and molecular systems (OpenGL) wwwxmds
Bullseye & Buster:(1.6.6-7) eXtensible Multi-Dimensional Simulator wwwxmds2
Bullseye:(3.0.0+dfsg-5) Buster:(2.2.3+dfsg-15) eXtensible Multi-Dimensional Simulator wwwxmpsolve
Bullseye:(3.2.1-2) Multiprecision polynomial solver (graphical version) wwwxpa-tools
Bullseye:(2.1.20-1) Buster:(2.1.18-4+rpi1) Tools for seamless communication between Unix programs wwwxplot
Bullseye & Buster:(1.19-9) simple on-screen x-y column data plotterxplot-xplot.org
Bullseye & Buster:(0.90.7.1-4) fast tool to graph and visualize lots of data wwwxppaut
Bullseye:(6.11b+1.dfsg-1.1) Buster:(6.11b+1.dfsg-1) Phase Plane Plus Auto: Solves many kinds of equations wwwxpython
Bullseye:(0.9.5-1) Native jupyter kernel for python (binary) wwwxtide
Bullseye:(2.15.2-1) Buster:(2.13.2-1+b1) provides tide and current predictions wwwxtide-coastline
Bullseye:(20020202-1.1) Buster:(20020202-1) coastline data for xtidextide-data
Bullseye:(20191229-1) Buster:(20100529-1) Harmonics data for xtide wwwxtide-data-nonfree
Bullseye & Buster:(20100529-1) Harmonics data for xtide (Canada, Netherlands, Germany and UK) wwwxtpcpp
Bullseye:(0.4.18-1) C++ version of X!TandemPipeline wwwxyscan
Bullseye:(4.50-1) Buster:(4.30-2+b2) data thief for scientists www- Back to top
Y
yagv
Bullseye:(0.4~20171211.r234ef16+dfsg-2) Buster:(0.4~20130422.r5bd15ed+dfsg-4) yet another G-code viewer wwwyaha
Bullseye:(0.1.83-2) Buster:(0.1.83-1) find split-read mappings on single-end queries wwwyale
Bullseye & Buster:(5.0.95-2) stellar data set from the Yale Bright Star Catalog wwwyanagiba
Bullseye:(1.0.0-2) filter low quality Oxford Nanopore reads basecalled with Albacore wwwyanosim
Bullseye:(0.1-3) read simulator nanopore DRS datasets wwwyorick
Bullseye:(2.2.04+dfsg1-12) Buster:(2.2.04+dfsg1-10) interpreted language and scientific graphics wwwyorick-av
Bullseye & Buster:(0.0.5-1+b1) write movies from Yorick in various formats wwwyorick-cubeview
Bullseye:(2.2-2.1) Buster:(2.2-2) 3D FITS data viewer specialized in spectro-imaging wwwyorick-curses
Bullseye & Buster:(0.1-6) interface to the (n)curses library for the Yorick languageyorick-data
Bullseye:(2.2.04+dfsg1-12) Buster:(2.2.04+dfsg1-10) interpreted library for the Yorick language wwwyorick-dev
Bullseye:(2.2.04+dfsg1-12) Buster:(2.2.04+dfsg1-10) development files for the Yorick interpreted language wwwyorick-gl
Bullseye & Buster:(1.1+cvs20070922+dfsg-6.1) OpenGL 3D graphics support for the Yorick language wwwyorick-gy
Bullseye & Buster:(0.0.5-1) GObject introspection and Gtk bindings for Yorick wwwyorick-gyoto
Bullseye:(1.4.4-3+b6) Buster:(1.3.1-1+b1) General relativistic geodesic integration for the Yorick language wwwyorick-hdf5
Bullseye:(0.8.0-8+b2) Buster:(0.8.0-8+b1) Hierarchical Data Format 5 interface for the Yorick languageyorick-imutil
Bullseye & Buster:(0.5.7-3) fast image manipulation routines for the Yorick languageyorick-mira
Bullseye & Buster:(1.1.0+git20170124.3bd1c3~dfsg1-2) optical interferometry image reconstruction within Yorick wwwyorick-ml4
Bullseye & Buster:(0.6.0-3) Matlab file format support for the Yorick languageyorick-mpeg
Bullseye & Buster:(0.1-3) MPEG output support for the Yorick language wwwyorick-mpy-common
Bullseye:(2.2.04+dfsg1-12) Buster:(2.2.04+dfsg1-10) Message Passing Yorick (common files) wwwyorick-mpy-mpich2
Bullseye:(2.2.04+dfsg1-12) Buster:(2.2.04+dfsg1-10) Message Passing Yorick (MPICH2 build) wwwyorick-mpy-openmpi
Bullseye:(2.2.04+dfsg1-12) Buster:(2.2.04+dfsg1-10) Message Passing Yorick (OpenMPI build) wwwyorick-optimpack
Bullseye & Buster:(1.3.2+dfsg+1.4.0-1) optimization of large scale problems for the Yorick language wwwyorick-soy
Bullseye & Buster:(1.4.0-3) sparse matrix operations for the Yorick language wwwyorick-svipc
Bullseye:(0.16-5+b2) Buster:(0.16-3) interprocess communication (shared memory...) for Yorick wwwyorick-yeti
Bullseye & Buster:(6.4.0-1) utility plugin for the Yorick language wwwyorick-yeti-fftw
Bullseye & Buster:(6.4.0-1) FFT plugin for the Yorick language wwwyorick-yeti-regex
Bullseye & Buster:(6.4.0-1) POSIX regular expressions for the Yorick language wwwyorick-yeti-tiff
Bullseye & Buster:(6.4.0-1) TIFF image format input for the Yorick language wwwyorick-ygsl
Bullseye:(1.2.1-1+b3) Buster:(1.2.1-1+b2) GSL special functions plugin for the Yorick language wwwyorick-ynfft
Bullseye & Buster:(1.0.3-1) nonequispaced fast Fourier transform for Yorick wwwyorick-yutils
Bullseye:(1.5.2-1.1) Buster:(1.5.2-1) various utilities for the Yorick languageyorick-z
Bullseye:(1.2.0+cvs20080115-5+b1) Buster:(1.2.0+cvs20080115-5) zlib, jpeg and png support for the Yorick language www- Back to top
Z
z3
Bullseye:(4.8.10-1) Buster:(4.4.1-1~deb10u1) theorem prover from Microsoft Research wwwz88
Bullseye & Buster:(13.0.0+dfsg2-6) Finite Element Analysis Program - runtime wwwz88-data
Bullseye & Buster:(13.0.0+dfsg2-6) Finite Element Analysis Program - data wwwzalign
Bullseye:(0.9.1-5) Buster:(0.9.1-4) parallel local alignment of biological sequences wwwzegrapher
Bullseye:(3.1.1-1) Buster:(3.0.2-1) plotting mathematical functions and sequences on the plane wwwzimpl
Bullseye:(3.3.6-4) Buster:(3.3.6-1) mathematical modeling language for optimization problems wwwztex-bmp
Bullseye & Buster:(20120314-2) universal macro processor www